| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1087 |
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| Symbol | gatB |
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| ID | 5669501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1296335 |
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| End bp | 1297852 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240019 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001505449 |
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| Protein GI | 158312941 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACAT CGGCTCCCGT CATCGCCACC CCGTCCTACG AGGACGCCAC CGCCCGGTAC
GAGTCGGTGA TCGGGCTGGA GACCCACGTC GAGCTCGGCA CCGCGTCCAA GATGTTCTGC
GGGTGCGCGA CCGCCTTCGG TGCGGAGCCG AACACCCAGG TGTGCCCGGT CTGCCTGGGC
CTGCCCGGTG CGCTGCCCGT GGTCAACGAG GCCGCGGTGC GTTTCGCGAC GCTGATCGGG
CTGGCGCTGA ACTGTTCGAT CGCGTCCTGG TGCCGGTTCG CCCGGAAGAA CTACTTCTAC
CCGGACATGC CGAAGAACTT CCAGATCAGC CAGTACGACG AGCCACTGTG CTCGAACGGC
TGGCTCGACG TCGAGGTCGA GGGCGAGATC CACCGGGTCG GGATCACCCG GGTTCACCTC
GAGGAGGACA CCGGCAAGTC CCTGCACGTC GGCGGGGCGA CCGGCCGCAT CCACGGGGCG
ACCCACTCGC TGGTCGACTA CAACCGCGCC GGCATCCCGC TGGTCGAGAT CGTCACCGAG
CCCGACATCC GCTCGCCGGA GGTCGCCCGC GCCTACGTCG ACGAGCTGCG TGAGCTGTGC
CGCGCGCTGG CCGTCTCGGA CGTCCGGATG GACCAGGGCT CGCTGCGCTG CGACGCGAAC
GTCTCGCTGC GGCTGCGCCC CGCGCCCGGT GAGCCCGACG CGCCGTTCGG CACCCGGTCG
GAGACGAAGA ACCTGAACTC GCTGCGCTCG GTCGAGCGGG CGGTGCGGTT CGAGGTCGTC
CGGCAGGCCG CGCTGCTGGA CGCGGGCGAC CGGGTCGTGC AGGAGACCCG GCACTTCGAC
GAGGCCTCCG GGCGGACGTC GTCGGGCCGG TCGAAGGAGG AGGCGACCGA CTACCGGTAC
TTCCCCGAGC CGGACCTGAC GCCCCTCGCG CTCACCCACG AGTACATCGA GGCCGTGCGC
GCGGTGCTGC CGGAGCTGCC GGCCCAGCGG CGCGTCCGGC TCATCGCCGA GCACGGGTAC
ACGGTGCGCG ACATCCAGGA GATGCGCAAC GCCGGGGTGC TCGACCTGGT CGAGGCGACG
GTGGCCGCCG GGGCCAGCCC GCCCGCGGCC CGCAAGTGGT GGCTCAACGA GCTCGCCCGG
CGCGCGGCGG ACGCCGGGGT CGAGCCGCGA GAGCTGGCGA TCGGCCCGGC CGACGTGGCG
CGGATCTGCG AGCTGGTCGC GGCCGGGCAG CTCACCGACG CGCTCGGACG CAAGGTCATC
GACGGGGTGC TCGCCGGTGA CGGTTCAGCC GACGAGGTCA TCGCCGCCCG TGACCTGGCT
GTGGTCTCCG ACGACTCGGC GCTGCGCGAC GCGGTCGACA CGGCGATCGC CGGCGCGCCC
GACATCGCCG AGAAGGTGCG GGGCGGCAAG GTGAACGCCG TCGGCCCGCT GGTCGGCGCG
GTCATGAAGG CGATGCGCGG CCAGGCCGAC GCCGCGGCCG TCCGCCGCCT GCTGCTGGAG
CGCCTCGAGG CCTCCTGA
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| Protein sequence | MSTSAPVIAT PSYEDATARY ESVIGLETHV ELGTASKMFC GCATAFGAEP NTQVCPVCLG
LPGALPVVNE AAVRFATLIG LALNCSIASW CRFARKNYFY PDMPKNFQIS QYDEPLCSNG
WLDVEVEGEI HRVGITRVHL EEDTGKSLHV GGATGRIHGA THSLVDYNRA GIPLVEIVTE
PDIRSPEVAR AYVDELRELC RALAVSDVRM DQGSLRCDAN VSLRLRPAPG EPDAPFGTRS
ETKNLNSLRS VERAVRFEVV RQAALLDAGD RVVQETRHFD EASGRTSSGR SKEEATDYRY
FPEPDLTPLA LTHEYIEAVR AVLPELPAQR RVRLIAEHGY TVRDIQEMRN AGVLDLVEAT
VAAGASPPAA RKWWLNELAR RAADAGVEPR ELAIGPADVA RICELVAAGQ LTDALGRKVI
DGVLAGDGSA DEVIAARDLA VVSDDSALRD AVDTAIAGAP DIAEKVRGGK VNAVGPLVGA
VMKAMRGQAD AAAVRRLLLE RLEAS
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