| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1085 |
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| Symbol | gatA |
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| ID | 5669499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1294441 |
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| End bp | 1295997 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240017 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_001505447 |
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| Protein GI | 158312939 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00466527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG TTTCCAGCAC CTCAACGCCT GCCGGCGCGG CCGCCGCCGG CGCGGGCGCC
CCCCGCCGCA CGGACGACGT CGTCCGGCTG ACCGCCGCCG AGACGGCGGC CGCGATCGCC
GCGGGCGAGC TGTCCGCGCA GGACGCGACC CTCGCCGCGC TCGACCGCAT CGCCAAGGTC
GACGAGGCCG TCCACGCCTT CCTGCATGTT GACGCCGAGG GCGCGCTCGC CGCCGCCCGC
GCGATCGACG CCCGCCGCGC CGCCGGGGAG AAGCTCGGCC CGCTCGCCGG CGTCCCGCTC
GCGCTCAAGG ACGTGCTCAC CGCGCGGGGC ATGCCGACGA CCTGCGGCAG CCGCATCCTG
GAGGGCTGGC GGCCGCCGTA CGACGCGACC GTGGTCTCCC GGTTGCGCGC CGCCGACGTG
GTCATCCTCG GCAAGGTCAA CATGGACGAG TTCGCGATGG GCTCGTCCAC CGAGAACTCG
GCGTACGGGC CGACCCGCAA CCCGTGGGAT CTCACCCGCA TCCCCGGCGG CAGCAGCGGT
GGCAGCGCGG CGGCGGTCGC TGCCTTCGAA GCGCCGCTGT CCATCGGCAC CGACACCGGC
GGGTCCATCC GCCAGCCGGC AGCGGTGTGC GGGCTGGTGG GGGTCAAGCC GACCTACGGC
GGGGTGAGCC GCTACGGCCT GGTCGCGTTC TCCAGCTCGC TCGACCAGGC CGGGCCGCTG
GCCCGCACCG TCGGCGACGC CGCCCTGCTG CACGCCGCGA TCGCCGGGCA CGACCCGCTG
GACAGCACCA GCGTCGACCT GCCGGTGCCG CCGGTGGTCG AGGCCGCCGC GCGCCGCGAC
ATCCGCGGCC TGCGGGTGGG CGTGGTGCGT GAGCTCTCCG GTGAGGGCTA CGACCCGGGT
GTGCAGGCGG CGTTCGACGC GGCGGTCCAG GAGCTGGCCG GTCTCGGCGC CGAGGTCGTG
GAGGTGAGCT GCCCGCACTT CACCTACGCG CTGGCGGCGT ACTACCTGAT CGCGCCGAGC
GAGTGCTCGT CCAACCTGGC CCGGTTCGAC GCGATGCGGT TCGGGCTGCG CGCCGGGGAC
GACGGCCGGG CCGGTGCCGA GGAGGTCATG AGCCACACCC GCGACGTCGG CTTCGGTGCC
GAGGTCAAGC GGCGGGTCAT GCTCGGCACG TACGCGCTGT CCTCGGGCTA CTACGACGCC
TACTACGGGC AGGCGCAGAA GGTCCGGACG CTGATCAGCC GCGACTTCGC CGCCGCCTAC
GAGAAGGCCG ACGTGCTGGT CTCGCCGACC ACGCCGACGC CGGCCTTCCC GCTCGGCGAC
AAGGTGGACG ACCCGGTGTC GATGTACCTG TCGGACCTGT GCACGATCCC GTCCAACCTG
GCGGGCGGGC CGGCGATGAG CCTGCCGGCC GGCCTGGTGG GCGGGCTGCC CGCCGGCATC
CAGATCATGG CCCCGGCGTT CGCGGACGAC CGGCTCTACC TGGTCGGCGG GGCGCTCGAG
GCCGCCCTGG AGGCGCGCCG CGGACATCCG CTGCTGGACG AGGCACCCGC GCTCTAG
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| Protein sequence | MTDVSSTSTP AGAAAAGAGA PRRTDDVVRL TAAETAAAIA AGELSAQDAT LAALDRIAKV
DEAVHAFLHV DAEGALAAAR AIDARRAAGE KLGPLAGVPL ALKDVLTARG MPTTCGSRIL
EGWRPPYDAT VVSRLRAADV VILGKVNMDE FAMGSSTENS AYGPTRNPWD LTRIPGGSSG
GSAAAVAAFE APLSIGTDTG GSIRQPAAVC GLVGVKPTYG GVSRYGLVAF SSSLDQAGPL
ARTVGDAALL HAAIAGHDPL DSTSVDLPVP PVVEAAARRD IRGLRVGVVR ELSGEGYDPG
VQAAFDAAVQ ELAGLGAEVV EVSCPHFTYA LAAYYLIAPS ECSSNLARFD AMRFGLRAGD
DGRAGAEEVM SHTRDVGFGA EVKRRVMLGT YALSSGYYDA YYGQAQKVRT LISRDFAAAY
EKADVLVSPT TPTPAFPLGD KVDDPVSMYL SDLCTIPSNL AGGPAMSLPA GLVGGLPAGI
QIMAPAFADD RLYLVGGALE AALEARRGHP LLDEAPAL
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