Gene Franean1_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1078 
Symbol 
ID5669492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1284352 
End bp1284858 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content72% 
IMG OID641240010 
ProductMarR family transcriptional regulator 
Protein accessionYP_001505440 
Protein GI158312932 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACAGC CGAAACCGCT TCCGACCGAC CCGATCGCGG AGGCGCACCG GCAGTGGACC 
GCCCACGGAT GGGGGCCCGT CGCGGACGGC ATGGCCGCCG TCACCTCGCT GATGCGCGCG
CAGCAGATCC TGCTCGCCCG GGTCGACGAG GTCCTGCGGC CCCTCGATCT CACCTTCGCC
CGCTACGAGC TGCTCATGCT CCTGCTGTTC AGCCGCAAGG GCTCGCTGCC GCTGAGCCGC
ATCGGGAGCC TGTTGCAGGT GCACCCGACC AGCGTCACCA GCGCCGTGGA CAGGCTGGAG
GCCCGCGGGC AGGTGCGCCG CCTGCCGCAT CCGACGGATC GGCGCGCGAT CCTCGCCGAG
ATCACCGAGG ACGGGCGGTC GACGGCGCTC GCGGCCACCG AGAAGCTCAA CGACACGGTG
TTCGCCGACC CCGGGCTTCC TGACAGCGGT GTGCGGGACC TCGTCGAGCT GCTCACCGAC
CTGCGGCGCG GTGCCGGCGA CTTCTGA
 
Protein sequence
MSQPKPLPTD PIAEAHRQWT AHGWGPVADG MAAVTSLMRA QQILLARVDE VLRPLDLTFA 
RYELLMLLLF SRKGSLPLSR IGSLLQVHPT SVTSAVDRLE ARGQVRRLPH PTDRRAILAE
ITEDGRSTAL AATEKLNDTV FADPGLPDSG VRDLVELLTD LRRGAGDF