Gene Franean1_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1058 
Symbol 
ID5669472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1241443 
End bp1244232 
Gene Length2790 bp 
Protein Length929 aa 
Translation table11 
GC content76% 
IMG OID641239987 
Producthypothetical protein 
Protein accessionYP_001505420 
Protein GI158312912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0721278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGC CACGGCGTTC CTCCCGGTCG GGCCGCTCCG GCGGCCCGGG TGAGGCGGGC 
GAGGGCCGGG GCGGCGCCGG TGGTTACCGC TGGTTCGCCC CCGAGGACCT GCCCGGCGAG
GAGCTGCCCG ACACCCGGGA GCAGGGCGAG GACGATCGGG GCGAGCCCCG GTCGGACGGG
CCGGAGCGGA CGTCCGCCTG GTACGACACG GACGACGGCA CCGACCCGGG CGACGGGGAG
TACCTCCGTC CCAGGGGCTA TGTGTCACGG CTGCCGGGCG GCCGGTCGGG GCGCGAGCGC
TCCGACTCCG GTGGCGCGGG CGCGCCGGCC GGGGGCGGTC GTGGATTCGC CCCGGACACC
TACGAGCGCG CCGGGTACGG CCCACCGGAC CGCGGCGAGG GAGATCCGGA GGCGGGCTAC
CGCTCCGCCT ACCCGGACGA GGCCTACGGC GACCCCGGGT ACGCCGGCGG CAGGTACGAG
GAGAGCACGT ACGAGTCCGG GCCGGAGGGC GAGGACCGGT ACGCGGGCGA CGGCTACCGG
CGGCCCGAGA CCGCCGACGG CGAGTACGAC CGCGGTCCCG GGTACCCGGG CGGGCCGCGG
TACGCGGGCG GTGACGGGTT CGCCGACGCT CCCGGCTTCC CCGGTGAGGC GGCTTTCACG
GGCGAGGCGG ATTACACCCG CGGTGGCGAG CCCCCGCTCC CGCGCCGGAC CAGCTACAAC
GCCGCTCGCG GCTATCCCGA CGACGGCGGC TACCGCGGCG AGCCCCGGTA CGCCGGGGAC
GGCGGCGGTG CCGCGGCGTA TGCCGGCACG CCGGGATACG CCCGCGACCC GGAGTTCGTC
CCGGACGGCT CCGGCGACGC CGAGTACTCC GGTGATGCGC GGTTCGCTGA AGGTGACGCG
CGGTTCGCGG GGGAGGTGCG GTACTCGGAC GACCCGCGGT TCTCGGGCGA CTCCCAGTTC
TCGGGAGATG CGGAGTACCC GAGGGACACG GCGTTCGCCG GTGACGAGGA GTACTCGGGG
GACGGCCCGC GTGCCGGTGG CGAGGGCTAC CCGGATGCCG CTCCGTACGT CCGCGGGTCC
GACCGGTACG AACGCGAGGG CGACTTCCCG GACGGCCCGG CATACCGGCG CGACGCCGCC
TACGCCGGTG GCGCCGACTA CACCGATGAT GCGGGCTACG CGGGTGGCGC CGCCTACGAG
GCGAAGGCCG ATGCCGGCCG CGGCACCGCT TTCGCGCCCG GCGGCGGAAC CGGCTACGGC
GGGGACACCG GCTACGGCGG GGACACCGGC TACTCCGGCG ACGGTGAGTA CACAGCCGCC
GGCTACGACG GAGCCGACGA TCGCGGCGGT GCCGAGCTGC CGCCGATGCC CGCGCAGAAG
ATCGATTTCT TCCGGCGCTA CGTGCGCCAG TCGACCGAGC CCGCCGGCAT GCCGGACGCC
CCGGCCGGGG ACGGCGGGGA CTCGACGGGG GCCCGTCCCG CCAGCCGTCG GGACGAGTTC
GACCTGCTCG ACTACGAGAT CCTCGGCGGG AGCGTGTCCG ACCGGCATGC CGGGGACGCC
CCCGCCGGCC GCGTCCCCGG CCGGCTCGAC GACGCCGGGG ACCCGATCGG GGACTACCCT
GCCGCGGAGC ACGCCTTCGC CGCGCGGGAC CGGGTGGATG TCCTCGTGCC GGGTGACCTC
CCGACACCGG GTGACCTCCC GACACCGGGT GGCCACCTGG CGGACGACGC CTTGGCGGCC
GACGACGTCG TGGCGACAGG CGACGTCGTG CCGGGCAGTG TTGTGCCGGA CAATGCCGCG
GCGGGCGAGG TCGTGGCGTC CGGCGAGTTG CTGGAGCCCG ACGACGTCGT CGCGTCCGGT
GATCTGTCGG CATCCGATGA TGTTGTGGCG TTCGATGACC TCCTGACGGG AGATGATCTC
CTGACAGGAG ACGAGGCAGG CACCGGCAGG ACGGCGGACG GGGCCGGCGC GCAGGCGCTG
GGCGCACCAC CGCCGGGCAC CGGCCTCGGC CTCGGTTTCG AGCAGGGGCC GTTCGACGGC
ACCAGCCGGC CGGCCGACGC GGACGTGATC GACGGATCGG GCGCGGACGC CGTGCCCGCG
CAGACCATGC CGGCGGGCAC TGTTCCGGCG GGCACTGTTC CGGCCGGCAC CGTTTCGGTG
GGTGCCGGGG GCGTGCCGTC CGGCGCGGTC CCGGTGGGCC TGGCGGTGGG GGACACCGAT
GGCCCGGCTG TGACCGGCGC GGTCCCGTCG GACGAGGCCC CGCTGGCCGC CGCCGTGGAC
GGCGCTTTGA ACGGAGCCGC CATGAACGGA GCCGGAGCGG ACGTGTCCGC CGCGGCGCTG
GTCGACCGGC AGGTGCTGGA ACGCCTCGCC GATCGGGTGG ACGAGCTCGT CCGCCTGCGC
CGCCACGACG CCGAGCTGGT CGACCGCCTG CACGCGGAGA ACGGCCGGCT GCGCGGCGGT
GAGCTGACCG AGGCGATGAC CCCGCTGCTG CGCGGGCTGG TCCGGCTGTA CGACCAGATG
AGCAGCCTCG GTGCCGAGGA CGCCCAGAGC GTCGCCGGGA TCCTGCGCAA GCAGCTGCTC
CAGATCCTGG ACCTGGCCGC GGACGTTCGT CCCTACGCGC CGGCGGCCGG CGACCCGTTC
GATCCGGGGC GGTCGCTGGG GGTCCGCCGG GTCGGCACCG ACGATCCGGC GCTGGAGGGA
ACTGTCGCCC GGACGGTTCG TCCCGGCTTC GTCCGCGGGG AGTCCATGGT CGTCCGACCT
GCCGAGACCG AGGTCTACCG GGCCTTCTGA
 
Protein sequence
MFQPRRSSRS GRSGGPGEAG EGRGGAGGYR WFAPEDLPGE ELPDTREQGE DDRGEPRSDG 
PERTSAWYDT DDGTDPGDGE YLRPRGYVSR LPGGRSGRER SDSGGAGAPA GGGRGFAPDT
YERAGYGPPD RGEGDPEAGY RSAYPDEAYG DPGYAGGRYE ESTYESGPEG EDRYAGDGYR
RPETADGEYD RGPGYPGGPR YAGGDGFADA PGFPGEAAFT GEADYTRGGE PPLPRRTSYN
AARGYPDDGG YRGEPRYAGD GGGAAAYAGT PGYARDPEFV PDGSGDAEYS GDARFAEGDA
RFAGEVRYSD DPRFSGDSQF SGDAEYPRDT AFAGDEEYSG DGPRAGGEGY PDAAPYVRGS
DRYEREGDFP DGPAYRRDAA YAGGADYTDD AGYAGGAAYE AKADAGRGTA FAPGGGTGYG
GDTGYGGDTG YSGDGEYTAA GYDGADDRGG AELPPMPAQK IDFFRRYVRQ STEPAGMPDA
PAGDGGDSTG ARPASRRDEF DLLDYEILGG SVSDRHAGDA PAGRVPGRLD DAGDPIGDYP
AAEHAFAARD RVDVLVPGDL PTPGDLPTPG GHLADDALAA DDVVATGDVV PGSVVPDNAA
AGEVVASGEL LEPDDVVASG DLSASDDVVA FDDLLTGDDL LTGDEAGTGR TADGAGAQAL
GAPPPGTGLG LGFEQGPFDG TSRPADADVI DGSGADAVPA QTMPAGTVPA GTVPAGTVSV
GAGGVPSGAV PVGLAVGDTD GPAVTGAVPS DEAPLAAAVD GALNGAAMNG AGADVSAAAL
VDRQVLERLA DRVDELVRLR RHDAELVDRL HAENGRLRGG ELTEAMTPLL RGLVRLYDQM
SSLGAEDAQS VAGILRKQLL QILDLAADVR PYAPAAGDPF DPGRSLGVRR VGTDDPALEG
TVARTVRPGF VRGESMVVRP AETEVYRAF