Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0985 |
Symbol | |
ID | 5669399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1151733 |
End bp | 1153913 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641239913 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_001505347 |
Protein GI | 158312839 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.623858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAAAGCC GAGTGGTCGA TCACGAGGAG TCATCCGCCG GCCGGGTCCG TCCAAGCGGC AAGATCCGCC TCGGGGTGGA CGTCGGCGGT ACCTTCACCG ACCTGGTCGC CGTCGACCCG GACGGCGCGG TGCGGTTCGC CAAGGTTCCC TCGGTGCCCG CCGACCCGTC CGACGGAGTG CTCGCCGCCC TCACCGCCGC GGGGCTGGAC GGACCACTCG TGGGCACGTT CGCCCACGGC ACCACCGTCG CCACGAACGC GCTGCTGGAG CGGGCCGGTG CCCGCACGGC CCTGGTGACC ACCCGCGGGT TCCGGGACGT GATCGAGATC GGCCGGCAGA ACCGGCCGTC GCTCTACGAC CTGACCCTCG ACCGGCCGCC CGCCCTCGTC CCGCGCGAGC TGCGCTTCAC CGTGGCGGAA CGGTGCGGCC CGCACGGGGT GCTCGAGCCG CTGCGGGCCG CCGAGGTGGA CCGGGTCGTC GAGGAGGTCG CGGCCGTCCC CGGCCTCGAC GCGGTCGCCG TGTGCCTGCT GTTCTCCTTC GCCCACCCCG ACCACGAACG CACCGTCGCG GCCGCCCTGC GCGCCCGGCT GCCCGGGGTC ACGGTGGTGG CCTCCAGCGA GGTCCTGCCG GTCTTCCGCG AGTACGAACG GTTCACCACG GCCGTCGCCG ACGCCTACCT GACCCCGCGG CTGTCGTCCT ATCTGCGGGC GCTCGAGCGG CGCTGCGCCG CCCGGGACGT CACCGTCCCG ATGATCATGC AGTCCTCGGG CGGGGTCACC GAGCTGGCAG AGGCGGCCGG CCACGCCGCC CGCTGCGTGC TCTCCGGGCC GGCCGGGGGA GTGGTCGGCG CCGCGTACGT GGCCGGCCTG TCCGGCGTGC GCGACCTGCT GACCTTCGAC ATGGGCGGCA CCTCCACCGA CGTGGCGCCG GTCCTCGACG GCCGCGCGCT GACCACCTCC GAGTCGGTGC TCGCCGGGGT ACCGATCGTG CTGCCCACTG TGGACGTCCA CTCGGTCAGC GCCGGCGGCG GGTCGATCGC CTGGGTCGAC GCCGGCGGCG CGCTGCGCGT CGGCCCGCGC TCCGCCGGCG CGGACCCGGG ACCGGCCTGC TACGGCCGCG GCGGCACGCG GCCCACGGTG ACCGACGCCG ACCTCTGCCT CGGCTACCTC GCCGACGGCG CCGGGCTCGG CGGCGAGGTC ACCCTCTCGC GGACGGCGGC CGAGGCCGCG CTGGGCGCGC TGGGCGCCCC CCTCGGGCTC TCACCGGTCG AGGCCGCCGC CGGGGTGGTG GCGGTCGCGG ACGCCGAGAT GACCCGTGCC CTGCGCGTCG TCTCCGTTGA GCGCGGGCTC GACCCGCGCG AGCTCGTGCT GGTCGCCTTC GGTGGAGCCG GCGGGACGCA TGCCTGCGCG CTCGCCGAGG AGCTCGGGAT GACCCGGGTC CTCGTCCCGC TCGCGGCCGG CGTCCTCTCC GCACTGGGCC TGGCGATCGG CGACGTCCGG CGCGACTACG CCCGCCCGCT GATCGGCCGT CTGGGCGAGG TCGACCTGAC GGCCGCGTTC GCCGGCCTCG TCGCGAGCGC CGGCCTCGTC GCGAGCGCCG GCCTCGCTGC AAGCGCCGGC CTGGCCGGGG GCCACGATTC CGCGGGCGCG GTCGTGCTCC AACACCGGCT GGACTGCCGC TACGTGGGGC AGTCCCACGA GCTGACCATC GACGTGGCGG AGCCCGGGGG CGGCGGCAGC GAGGCCGCGG GCGGCAGCGG TGCGGCAAAC AGCAGCGGTG CGGCGGGCGG CTGGGCGGCG GGGGCCGGCG GGCTCGTTGA CGCCGTCCGT GCTGCCTTCG AGGCCGAGCA CCTGCGCCGC TACGGGCACA TCGCGGCGGG CCGCGAGATC GAGACGGTGG CCGTCCGCCT GGTGGTGACC GTGCCCGGGC CCAGACCGAG ACCGGTCGCC CCGCGCCCCG ATCCCACGGC GCGCCGCGGC CGGCGCCGGG CCTGGACGGA CAGCGCGTGG CACGAGATCG ACGTGATCCC CCGGGCAGCC CTCGGACCGG GAGACACGGT GACCGGCCCG GCCGTCGTGG AGTTCGCCGA GGCGACCTGC CTGCTCCGCC GTGGTTGGAC CGGCGTCGTG GACGACATCG GGACGATCGT CCTCACCCAC ACGACGCCGT CCGCCGTCTG A
|
Protein sequence | MESRVVDHEE SSAGRVRPSG KIRLGVDVGG TFTDLVAVDP DGAVRFAKVP SVPADPSDGV LAALTAAGLD GPLVGTFAHG TTVATNALLE RAGARTALVT TRGFRDVIEI GRQNRPSLYD LTLDRPPALV PRELRFTVAE RCGPHGVLEP LRAAEVDRVV EEVAAVPGLD AVAVCLLFSF AHPDHERTVA AALRARLPGV TVVASSEVLP VFREYERFTT AVADAYLTPR LSSYLRALER RCAARDVTVP MIMQSSGGVT ELAEAAGHAA RCVLSGPAGG VVGAAYVAGL SGVRDLLTFD MGGTSTDVAP VLDGRALTTS ESVLAGVPIV LPTVDVHSVS AGGGSIAWVD AGGALRVGPR SAGADPGPAC YGRGGTRPTV TDADLCLGYL ADGAGLGGEV TLSRTAAEAA LGALGAPLGL SPVEAAAGVV AVADAEMTRA LRVVSVERGL DPRELVLVAF GGAGGTHACA LAEELGMTRV LVPLAAGVLS ALGLAIGDVR RDYARPLIGR LGEVDLTAAF AGLVASAGLV ASAGLAASAG LAGGHDSAGA VVLQHRLDCR YVGQSHELTI DVAEPGGGGS EAAGGSGAAN SSGAAGGWAA GAGGLVDAVR AAFEAEHLRR YGHIAAGREI ETVAVRLVVT VPGPRPRPVA PRPDPTARRG RRRAWTDSAW HEIDVIPRAA LGPGDTVTGP AVVEFAEATC LLRRGWTGVV DDIGTIVLTH TTPSAV
|
| |