Gene Franean1_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0969 
Symbol 
ID5669383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1131590 
End bp1132846 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content78% 
IMG OID641239897 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_001505331 
Protein GI158312823 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.211572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.251268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGGCC CCGCGGGCGG CGCGACCAGC CACGCGAACA GCCCCGCCGC CAGCCCCGCC 
CCGCTCGGCT GGCTGGGCGA GGCGGCCCGG CTGCGGGCCG AGGCCGGGCT GCACCGCGTG
CTGCGCCCCC GGGCGCCCCG CGCCGAGCGC GGGCCCACGG GCGCGCCGGC GCTGCCCGCA
CACGGCTCGC TGCAGCCGTG GACCGACGGT GATCTCCTGC TCGACCTCGC CGGCAACGAC
TACCTCGGGC TGGCCCGCCA TCCGGAGGTG GTCGAGGGCG GCATCGCCGC GCTGCGCGCG
TTCGGCGCCG GGTCCACCGG CAGCCGGCTG GTCAGCGGCA CCACGACGCT GCACGGGGAG
CTCGAGTCCG CGCTCGCCGA GCACCTCGGC TTCGGCTCCG CGCTCGTCTT CTCCTCGGGC
TACGCCGCCA ACCTGGCGAT GCTGACCGTC CTCACCGGGC CTGGTGACCT GGTGCTCTCC
GACGAGCGCA ACCACGCCTC ACTGGTCGAC GCCTGCCGGC TGTCCCGCGC GGACGTCCTG
GTCACGCCAC ATTCGGACGT CGACGCGGTC GACGAGGCGC TGGCCACACG TTCCTGGCGG
CGCGCGTTCG TCCTCACCGA CTCGATCTTC TCCGCGGACG GCGATCTCGC CCCGCTGGCC
GCCCTGCACG CGGTCGCCCG GCGACACGGC GCCGTCCTGC TCGTCGACGA GGCGCACGGG
CTCGGCGTCG TGGGCCCGGG CGGGCGCGGG GCGCTCGCCG CGGCCGGGCT GGCCGGCGAG
CCTGACGTGA TCGCCACCGT GACCCTCTCC AAGTCGCTGG GCAGCCAGGG CGGTGCCGTC
CTCGGGCCGG CCGCGCTGCG TGACCACCTG ATCGACACGG CCCGGACCTT CATCTTCGAC
ACCGGGCTGG CTCCGGCGTG CGCGGGCTCC GCGCTGGCGG CGCTGCGGCT GCTCACCCGC
CACCCGGACC TCCCGGAGCG GGTCCAGCGG CGCGCGCGGG AGATCGCCGC CGCGACCGGG
GCCCCGGAGC CGGCCGGCGC GGTGGTGTCG GTGGTGCTCG GCGATCCCGA GCGGGCCGTC
GCGGTCGCCG CGGCCTGCCG CGACGCCGGG GTCGCCGTCG GCTGCTTCCG GCCCCCGACG
GTTCCCGCCG GGACGAGCCG GCTGCGGGTG GCGGCCCGCG CCGACCTCAC CGAGGCCGAT
GTGAGCCGCG CGGTCGGCGT GATCACCGAC GCCATCGGCC GGTTCCCCGC GCCGTGA
 
Protein sequence
MPGPAGGATS HANSPAASPA PLGWLGEAAR LRAEAGLHRV LRPRAPRAER GPTGAPALPA 
HGSLQPWTDG DLLLDLAGND YLGLARHPEV VEGGIAALRA FGAGSTGSRL VSGTTTLHGE
LESALAEHLG FGSALVFSSG YAANLAMLTV LTGPGDLVLS DERNHASLVD ACRLSRADVL
VTPHSDVDAV DEALATRSWR RAFVLTDSIF SADGDLAPLA ALHAVARRHG AVLLVDEAHG
LGVVGPGGRG ALAAAGLAGE PDVIATVTLS KSLGSQGGAV LGPAALRDHL IDTARTFIFD
TGLAPACAGS ALAALRLLTR HPDLPERVQR RAREIAAATG APEPAGAVVS VVLGDPERAV
AVAAACRDAG VAVGCFRPPT VPAGTSRLRV AARADLTEAD VSRAVGVITD AIGRFPAP