Gene Franean1_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0889 
Symbol 
ID5669303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1036936 
End bp1037409 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content74% 
IMG OID641239816 
ProductMarR family transcriptional regulator 
Protein accessionYP_001505251 
Protein GI158312743 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.432936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.269103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGACG CCCGCGGCAT GCGGGCCTGG CGGCAGCTCC TGCGGGCGCA CGCGCACGCC 
ACGCGGCTCC TGGAAGCCGA GCTCGAGGCC GCGCACCAGC TCCCGCTCGC CTCCTACGAC
GTCCTCGTGC AGCTTGCCGA GGCACCCGGG TACCAGCTCC GGATGAGCGA GCTGGCGCAG
AAGGTGCTGC TGTCCCGCAG TGGGCTGACC CGGCTGGTCG ACCGCCTGGA GCGGGAGGGC
CTGGTGGAAC GCCGCTCCTG CCCGTCGGAC GCCCGCGGCA CGCTGGCGAC GCTCACCGAC
ACGGGGCTGA AGCGGCTGAG GGACGCCTCG GGAACCCACC TCCGAGGGGT GGCGCGGCAC
GTTCTCGACC ATTTCACCCC GCAGGAGCAG GATCTCCTCG GGGATCTGCT GAGCCGGCTC
GGCGGTCCCG AACCCACGCC CGCGCCCGGC ACCGGCTGCG GCTCCGGTGT CTGA
 
Protein sequence
MVDARGMRAW RQLLRAHAHA TRLLEAELEA AHQLPLASYD VLVQLAEAPG YQLRMSELAQ 
KVLLSRSGLT RLVDRLEREG LVERRSCPSD ARGTLATLTD TGLKRLRDAS GTHLRGVARH
VLDHFTPQEQ DLLGDLLSRL GGPEPTPAPG TGCGSGV