Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0833 |
Symbol | |
ID | 5669249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 974309 |
End bp | 976132 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641239762 |
Product | phosphoenolpyruvate carboxykinase |
Protein accession | YP_001505197 |
Protein GI | 158312689 |
COG category | [C] Energy production and conversion |
COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.961355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACCG CGGCACAGAT TCCCGGGCTG GATGCCGCCC CCACCAAGCA CGCCAGGCTG CTCGCCTGGG TGCGTGAGAT CGCCGAACTC ACCCAGCCGG ACCGTATTGA ATGGTGCGAC GGCTCGGAAT CCGAGTTCGA TCGGCTGACA TCACTGCTCA TCGACAAGGG CACTCTCGTC CAGCTTGACG ACGAGAAACG CCCGAACAGC TTCTACGCCG CTTCGGACCC CAGCGACGTG GCGCGTGTGG AGGACCGGAC CTACATTTGT TCGGAAAAGG CCGAGGACGC CGGCCCGACG AACAACTGGC TTGATCCGGC CGAAATGCGC ACGAAGCTGG GTAAGCTCTT CTCCGGATGC ATGCGGGGAC GGACGATGTA TGTCGTCCCG TTCTGCATGG GTCCGCTCGG TTCGCACATC TCGGCGCTCG GCGTCGAAAT CACGGACTCG CCCTACGTCG TCATCTCTAT GCGCACGATG ACCCGTATGG GGACTCCCGC GCTGGACCAG CTCGGTGACG ACGGCTTCTT CGTCCCGGCG GTTCATTCAC TGGGCGCGCC CCTGGAGCCG GGCGCGACGG ACGTCCCGTG GCCGTGTAAT TCGACGAAGT ACATCACGCA CTTCCCGGAG ACCCGCGAGA TCTGGTCGTA CGGCTCCGGT TACGGCGGCA ACGCGCTGCT CGGCAAGAAG TGCTACGCCC TGCGCATCGC CTCGGTCATG GCGCGTGACC AGGGGTGGCT GGCCGAGCAC ATGCTGATCC TCAAGCTGAC CTCGCCGGCC GGCAAGGTCC ACTTCATCGC CGCCGCGTTC CCGTCGGCAT GCGGCAAGAC CAACCTCGCG ATGCTGATCC CGACGCTGCC CGGCTGGAAG GCCGAGACGG TCGGCGACGA CATCGCCTGG ATGCGCTTCG GTGACGACGG CCGGCTCTAC GCCGTCAACC CGGAGGCGGG TCTGTTCGGG GTGGCTCCGG GCACCGGCGA GGAGACCAAT CCGAACGCGG TCAAGACCCT GTGGGGGAAC GCGGTCTTCA CCAACGTCGC GCGGACCGAC GACGGTGACG TCTGGTGGGA GGGCCTCACT CCGGACAAGC CCGCACACCT CATCGACTGG AAGGGCCGGG ACTGGACGCC CGACTCGACC GAACCGGCCG CGCACCCGAA CGCCCGGTTC ACCGTGCCGG CGAGCCAGTG CCCGACCATG GCGCCCGAGT GGGAGAACCC GGCCGGCGTT CCCATCTCGG CGATCCTGTT CGGCGGCCGC CGCGCGACGG CCGTCCCGCT GGTGACCGAG GCGCCGGACT GGCAGCGCGG GGTGTTCTTC GGCTCGATCG TCTCCTCCGA GACCACTGCC GCCGCGGCCG GGGCGATCGG CAAGCTGCGA CGGGACCCGT TCGCGATGCT GCCGTTCTGC GGCTACAACA TGGCCGACTA TTTCGCCCAC TGGCTGGAGA TCGGCAACAA GGCCGACCCG GACAAGCTGC CGCGGATCTA CTACGTGAAC TGGTTCCGCA AGAGCCCCGA GGGCCGTTAC CTCTGGCCAG GGTTCGGCGA GAACAGCCGC GTGCTGGCCT GGGTCGCGAG CCGGCTCGAC GGCGAGGCGA AGGGCACGGA GACCCCGCTG GGCATCCTCC CGGCCCCGGG CGAGCTCCCC ACCGAGGGCC TGGACGTCTC CGAGGCCGAC CTGGAGACGC TGCTCTCCGT CGACACCGAG GTGTGGCGGC AGGAGGCGGA GCTGATCCCG GAGCACTACA ACACCTTCGG CGACCGCCTG CCGGCCCAGC TGTGGGCGGA GCACGAGGCC CTCACCAAGC GCCTCAACGG CTGA
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Protein sequence | MTTAAQIPGL DAAPTKHARL LAWVREIAEL TQPDRIEWCD GSESEFDRLT SLLIDKGTLV QLDDEKRPNS FYAASDPSDV ARVEDRTYIC SEKAEDAGPT NNWLDPAEMR TKLGKLFSGC MRGRTMYVVP FCMGPLGSHI SALGVEITDS PYVVISMRTM TRMGTPALDQ LGDDGFFVPA VHSLGAPLEP GATDVPWPCN STKYITHFPE TREIWSYGSG YGGNALLGKK CYALRIASVM ARDQGWLAEH MLILKLTSPA GKVHFIAAAF PSACGKTNLA MLIPTLPGWK AETVGDDIAW MRFGDDGRLY AVNPEAGLFG VAPGTGEETN PNAVKTLWGN AVFTNVARTD DGDVWWEGLT PDKPAHLIDW KGRDWTPDST EPAAHPNARF TVPASQCPTM APEWENPAGV PISAILFGGR RATAVPLVTE APDWQRGVFF GSIVSSETTA AAAGAIGKLR RDPFAMLPFC GYNMADYFAH WLEIGNKADP DKLPRIYYVN WFRKSPEGRY LWPGFGENSR VLAWVASRLD GEAKGTETPL GILPAPGELP TEGLDVSEAD LETLLSVDTE VWRQEAELIP EHYNTFGDRL PAQLWAEHEA LTKRLNG
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