Gene Franean1_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0810 
Symbol 
ID5669226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp948112 
End bp949068 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content74% 
IMG OID641239738 
ProductPpx/GppA phosphatase 
Protein accessionYP_001505174 
Protein GI158312666 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.208973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG TGGCCGCGAT CGACTGTGGC ACCAACTCCA TCCGACTGCT CGTGGCCGAG 
CTCGACGAGG GGGCGGCCGG CTCCGGTGGG CGGCTGCGCG AGCTGATCCG CCGGATGGAG
ATCGTCCGGC TCGGCGCCGG CGTCGACCGC ACCGGTGAGC TGGCGCCCGA GGCGCTGGCC
CGGACGTTCA CCGCGCTGCG CGACTACTCC GACGAGATCA CCCGGCTCGG CGCGACCCGC
GTCCGGATGG TCGCCACCAG CGCCACCCGG GACGCGCGCA ACCGTGCCGA GCTGGTGGAC
GGCGTCCGCG CGATCCTGGG TGTCGACCCC GAGGTGATCA GCGGTGGCGA GGAGGCTGCG
CTCTCCTTCG CCGGCGCGAT CGGCGACCTC GACGGGGTCG CGACTCCGAT CCTGCTGGCC
GACATCGGCG GCGGCTCGAC CGAGCTGGTG CTCGGCGGCG CCGAGGGCGT GCGGGAGTCG
ATTTCGGTCA ACGTGGGCTG CGTCCGCATG GCGGAACGCC ACCTGCACTC CGATCCGCCG
GCACCGGAGC AGATCGCCGC GATCGTCGCC GACGTCCACG CGGCGTTCGA CCTGGCCGAG
CGCACCGTGC CCATCACCAC CGCCGCCACC CTGGTCGGTG TCGCCGGGAC GGTGACCACC
GTCGCGGCGC TGGCGGCCGA CCTGCCCACC TACGACCCCG ACCGCATCCA CCTGATGGTC
ACCTCGGCCG CCGACGTGGC CGCCGTCACC GCGAGCCTGC TCGAAATGAC CCACGCCCAG
CGCGCCGCGC TGCCGGTGAT GCACCCCGGG CGGGTGGACG TCATCGCCGC CGGCGCACTG
GTGCTGCGGA CCCTCATGGA GCGGTCCGGA ACCTCCATGG TGATCGCGAG CGAGCGGGAC
ATCCTCGACG GCATCGCACT CTCGCTGGGC GGAGTGGTCG AGTCCGGGGC TCGGTGA
 
Protein sequence
MTRVAAIDCG TNSIRLLVAE LDEGAAGSGG RLRELIRRME IVRLGAGVDR TGELAPEALA 
RTFTALRDYS DEITRLGATR VRMVATSATR DARNRAELVD GVRAILGVDP EVISGGEEAA
LSFAGAIGDL DGVATPILLA DIGGGSTELV LGGAEGVRES ISVNVGCVRM AERHLHSDPP
APEQIAAIVA DVHAAFDLAE RTVPITTAAT LVGVAGTVTT VAALAADLPT YDPDRIHLMV
TSAADVAAVT ASLLEMTHAQ RAALPVMHPG RVDVIAAGAL VLRTLMERSG TSMVIASERD
ILDGIALSLG GVVESGAR