Gene Franean1_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0809 
Symbol 
ID5669225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp947579 
End bp948115 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content77% 
IMG OID641239737 
Producthypothetical protein 
Protein accessionYP_001505173 
Protein GI158312665 
COG category[S] Function unknown 
COG ID[COG1507] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.194337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCGCC AGCTCGGCCG TCCGCCGCGG GCCGTGCTCG GCGTCGCGCA CCGCTGTTCG 
TGCGGGCTGC CGGACGTCGT GGAGACAGCC CCGCGGCTCG AGGACGGCAC GCCGTTCCCG
ACGCTGTTCT ACCTGACCTG CCCGCGGGCG GCGGCGGCGA TCTCGCGGCT GGAGGGCTCC
GGCCTCATGC GGGAGATGAC CGCGCGGCTG GGGACCGATC CCGGGCTCGC CGCCGCCTAC
CGCGCCGCCC ACCGCGACTA CCTGGCGCGC CGCGACGCCC ACGGAACCCT GCCCGGGGAC
CCGAGCGCCG GTGGGATGCC CGACCGGGTC AAGTGCCTGC ACGTGCTGGT CGCCCACAGC
CTGGCCGCCG GCCCGGGAGT CAACCCGTTC GGTGACGAGG CTCTCGCTCA GCTCGCCGAC
TGGGGGGCCC GCGGGCCGTG CGTCGAGCCG GACGGCGCAT CCTGTGCGGG GGAACCGGGG
GGCTCGCGCG GCCATGCGGC ACGCGTCGGC CAGGGACGAG AGGAGACCGC CGGATGA
 
Protein sequence
MHRQLGRPPR AVLGVAHRCS CGLPDVVETA PRLEDGTPFP TLFYLTCPRA AAAISRLEGS 
GLMREMTARL GTDPGLAAAY RAAHRDYLAR RDAHGTLPGD PSAGGMPDRV KCLHVLVAHS
LAAGPGVNPF GDEALAQLAD WGARGPCVEP DGASCAGEPG GSRGHAARVG QGREETAG