Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0789 |
Symbol | |
ID | 5669205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 916336 |
End bp | 916905 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641239717 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001505153 |
Protein GI | 158312645 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0961669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.201216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCTCA CGCCCACCGC CATCGACGGC GTGACGATCG TCGACGTCGA GGCGTTCTCG GACGACCGCG GCCTGTTCGC GCGCACCTTC TGCCAGGAGG AGTTCGCCGC CGCCGGGCTG GAGGTGGCCG TCGCGCAGTG CAGCGTCGCC TACAACCGCC GTGCCGGGAC GATCCGCGGC CTGCACTGGG CCGGCGAGCC GGTGCGCGAG ACCAAGCTGG TCCGCTGCAC CCGCGGCGCC CTGCTGGACG TCATCGTCGA CTCGCGGCCC GGCTCGGCGA CCTACCTGGA ACACGTGGCC GTGGAGCTGA CCGCGGACAA CCACCGGGCG TTGTTCATCG CCGCCGGGCT CGCGCACGGC TACCAGACCC TGGTGGACGA CACCGAGGCC ACGTACCAGA TGAACGTCCC GTTCACTCCG GGGCATGACC GTGGTCTCCG TTTCGACGAC CCCCGGCTCG GGATCGCCTG GCCGCTGCCC GTCTCGGTGA TCTCGGAGAA GGACCGCGGC TGGCCGCTGC TGCCCGCCGG CGTCCCGGGC GACGAGCTCA TCCAGCTCGG CCAGACCTGA
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Protein sequence | MKLTPTAIDG VTIVDVEAFS DDRGLFARTF CQEEFAAAGL EVAVAQCSVA YNRRAGTIRG LHWAGEPVRE TKLVRCTRGA LLDVIVDSRP GSATYLEHVA VELTADNHRA LFIAAGLAHG YQTLVDDTEA TYQMNVPFTP GHDRGLRFDD PRLGIAWPLP VSVISEKDRG WPLLPAGVPG DELIQLGQT
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