Gene Franean1_0774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0774 
Symbol 
ID5669190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp903278 
End bp903826 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content72% 
IMG OID641239702 
Producthypothetical protein 
Protein accessionYP_001505138 
Protein GI158312630 
COG category[S] Function unknown 
COG ID[COG1302] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.28582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.234272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA CCACGCGGAC ACAGGGCGTC GAGACAGGCA CTGCCCAGGG ACCGGGGGAG 
AGCCGGCCCG GTGGGCCCGA CCGGGCCCGG TCGGGGGAGG GCCACTGGAA CGGCGTGGCC
GAGCGGTCCA CGGCTCCCGC CCGGCGTACC TCCACCGAGC TGGTGACGGC GCAGGGACGG
ACATCGATCG CGGACTCCGT GGTCCGCAAG ATCGCCGGTG TCGCGACCAG GGAGGTGACC
GGGGTCCACG CTCTCGGAAC CGGTGGCAGC CGCGCGATCG GCACCTTCCG ATCGCACCTG
CCGGGAACGA GCCCCAGCGT GTCGCAGGGC GTGTCGGTGG AGGTGGGCGA GCGGCAGGCC
GCGATCGACC TGGACGTCGT CTGCGAGTAC GGCGTCTCGA TCGTCGACCT CTCGCAGGCG
GTCCGCCGCA ACGTCGTCGA CTCGGTCGAG CAGATGACCG GCCTGGAGGT CACCGAGGTC
AACATCGCCG TGGACGACGT CTACATCGGC GACGACGAGG CGGCGGAGGC CCCGCCACGG
GTCCGTTGA
 
Protein sequence
MTTTTRTQGV ETGTAQGPGE SRPGGPDRAR SGEGHWNGVA ERSTAPARRT STELVTAQGR 
TSIADSVVRK IAGVATREVT GVHALGTGGS RAIGTFRSHL PGTSPSVSQG VSVEVGERQA
AIDLDVVCEY GVSIVDLSQA VRRNVVDSVE QMTGLEVTEV NIAVDDVYIG DDEAAEAPPR
VR