Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0753 |
Symbol | |
ID | 5669169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 878437 |
End bp | 879867 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641239680 |
Product | O-antigen polymerase |
Protein accession | YP_001505117 |
Protein GI | 158312609 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.409596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000594246 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGCTGC CCGGACGGGC GGCGCTCCGG ACGGTGGCGG CGCTCCCGAT CGCCAGGTGG CGGCCGGACG CGGTGAGCGT GCTGACACTC CTCGGCGTGC TGCTGTTCGT CATCCCGGCG CGCAACACCC TGCAGTCGCT CGGCGCCGCG GGCCGGCCGG TGTTCCTGCT CGGCCTGGTG CTGGCCTGCG CCTGGCTGTG CACCTGGCTG CATCCCGGCC TGGTCCGCCG TGGCCGCCAG CCGGTCCGGG GCCTGTTGCT CATCTATCTG GGTGCGCTGC TCGCCGCCTA TGTGGCCGGT CAGCGCCGCG GGCTCGACGG CGTGGAGGCC CGTGCCTCGG ACCGGTCGAT CCTGGCTGTC CTGGCGCTCG TCGGCATCGC GCTCGCGGCA GCCGACGGAA TTCCCTCGCG GGCCCGGCTC GAGGTCCTGA TCTCGCGCAT CATGTGCTTC GGGGCCGTGA TGGCGCTGTT CGGAATCGTC CAGTACCTGA CGCACGAGGA CTACAGCAGG TACCTGCGGC TTCCCGGGTT CGTGATGTGG TCCCCGGCGC TCGAGTCCGT CTCACGAGGG GGCGGCACCT CCCGGGTCGC CGGCACGGCG TCGCACTACA TCGAGTTCGG TGTGGTCGTC GCCATGGTCG TCCCGCTGGC GCTGTACCGG ACTTCTCACG CTGTCACCAA GGGCGCCCGG CAGCGTGCCG CCGGGGCGCT GGTGCTGACC GCGGCGGCCG CCCCTCTCTC CGTCTCCCGG ACGGCGATCA TCGGGCTTGG CTGCGTGCTG CTGGTCCAGA GCATCGTGTG GAGCTGGCGG CGGCGGTTCA ACGTGTTCGT CTGGCTGGTG ATCGGGGTCG GCGCGTTCGG TGCCGCCGTG CCCGGCGTGC TCGGCACGCT GCGCAGTCTG TTCCTGAACT ACAAGACTGA TCCCAGCTAT CAGGGACGGA TCGCGGACTA CGCGGTCGCG CAGGCCTACA TCAGCGAGCG GCCGTGGTTC GGGCGCGGGC CGGGCACCTT CATCCCGGCG AAGTACTTCT TCCTCGACAA CCAGTACCTC GGGACCATCC TCACCTCCGG ATACGTGGGT CTGGCCGCGC TCGTCATCGT CATGCTCGGC GGGATCACGA TGGCGTTCGG GGTGGCCCGG CGCGCCGCCG ACGCGGCGAC CCGAGAACTG GCCCAGGCCC TCGCCGCGAT GCTCGTCGCC GTCGCGGCGG CCTCGTACAG CTTCGACTCA CTGTCGTTCC CGGCCTTCGC CGGCCTGTTC TACCTGACGC TGGGTGTCAC CGGCGCGTTG TGGCGACTCG AACAGCGGCC CGTGCCCACA CCGGCCGGGC CTGCCGCGGC GGCACCCGTC CAGTGGCGGG ACCCGCGCGG TGACCAGCCA AGCGTGGCGG AGCTGGTCCC GGCGGCCCGG CAGCCCGCCG GCATCGCGTG A
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Protein sequence | MTLPGRAALR TVAALPIARW RPDAVSVLTL LGVLLFVIPA RNTLQSLGAA GRPVFLLGLV LACAWLCTWL HPGLVRRGRQ PVRGLLLIYL GALLAAYVAG QRRGLDGVEA RASDRSILAV LALVGIALAA ADGIPSRARL EVLISRIMCF GAVMALFGIV QYLTHEDYSR YLRLPGFVMW SPALESVSRG GGTSRVAGTA SHYIEFGVVV AMVVPLALYR TSHAVTKGAR QRAAGALVLT AAAAPLSVSR TAIIGLGCVL LVQSIVWSWR RRFNVFVWLV IGVGAFGAAV PGVLGTLRSL FLNYKTDPSY QGRIADYAVA QAYISERPWF GRGPGTFIPA KYFFLDNQYL GTILTSGYVG LAALVIVMLG GITMAFGVAR RAADAATREL AQALAAMLVA VAAASYSFDS LSFPAFAGLF YLTLGVTGAL WRLEQRPVPT PAGPAAAAPV QWRDPRGDQP SVAELVPAAR QPAGIA
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