Gene Franean1_0753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0753 
Symbol 
ID5669169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp878437 
End bp879867 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content72% 
IMG OID641239680 
ProductO-antigen polymerase 
Protein accessionYP_001505117 
Protein GI158312609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.409596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000594246 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGCTGC CCGGACGGGC GGCGCTCCGG ACGGTGGCGG CGCTCCCGAT CGCCAGGTGG 
CGGCCGGACG CGGTGAGCGT GCTGACACTC CTCGGCGTGC TGCTGTTCGT CATCCCGGCG
CGCAACACCC TGCAGTCGCT CGGCGCCGCG GGCCGGCCGG TGTTCCTGCT CGGCCTGGTG
CTGGCCTGCG CCTGGCTGTG CACCTGGCTG CATCCCGGCC TGGTCCGCCG TGGCCGCCAG
CCGGTCCGGG GCCTGTTGCT CATCTATCTG GGTGCGCTGC TCGCCGCCTA TGTGGCCGGT
CAGCGCCGCG GGCTCGACGG CGTGGAGGCC CGTGCCTCGG ACCGGTCGAT CCTGGCTGTC
CTGGCGCTCG TCGGCATCGC GCTCGCGGCA GCCGACGGAA TTCCCTCGCG GGCCCGGCTC
GAGGTCCTGA TCTCGCGCAT CATGTGCTTC GGGGCCGTGA TGGCGCTGTT CGGAATCGTC
CAGTACCTGA CGCACGAGGA CTACAGCAGG TACCTGCGGC TTCCCGGGTT CGTGATGTGG
TCCCCGGCGC TCGAGTCCGT CTCACGAGGG GGCGGCACCT CCCGGGTCGC CGGCACGGCG
TCGCACTACA TCGAGTTCGG TGTGGTCGTC GCCATGGTCG TCCCGCTGGC GCTGTACCGG
ACTTCTCACG CTGTCACCAA GGGCGCCCGG CAGCGTGCCG CCGGGGCGCT GGTGCTGACC
GCGGCGGCCG CCCCTCTCTC CGTCTCCCGG ACGGCGATCA TCGGGCTTGG CTGCGTGCTG
CTGGTCCAGA GCATCGTGTG GAGCTGGCGG CGGCGGTTCA ACGTGTTCGT CTGGCTGGTG
ATCGGGGTCG GCGCGTTCGG TGCCGCCGTG CCCGGCGTGC TCGGCACGCT GCGCAGTCTG
TTCCTGAACT ACAAGACTGA TCCCAGCTAT CAGGGACGGA TCGCGGACTA CGCGGTCGCG
CAGGCCTACA TCAGCGAGCG GCCGTGGTTC GGGCGCGGGC CGGGCACCTT CATCCCGGCG
AAGTACTTCT TCCTCGACAA CCAGTACCTC GGGACCATCC TCACCTCCGG ATACGTGGGT
CTGGCCGCGC TCGTCATCGT CATGCTCGGC GGGATCACGA TGGCGTTCGG GGTGGCCCGG
CGCGCCGCCG ACGCGGCGAC CCGAGAACTG GCCCAGGCCC TCGCCGCGAT GCTCGTCGCC
GTCGCGGCGG CCTCGTACAG CTTCGACTCA CTGTCGTTCC CGGCCTTCGC CGGCCTGTTC
TACCTGACGC TGGGTGTCAC CGGCGCGTTG TGGCGACTCG AACAGCGGCC CGTGCCCACA
CCGGCCGGGC CTGCCGCGGC GGCACCCGTC CAGTGGCGGG ACCCGCGCGG TGACCAGCCA
AGCGTGGCGG AGCTGGTCCC GGCGGCCCGG CAGCCCGCCG GCATCGCGTG A
 
Protein sequence
MTLPGRAALR TVAALPIARW RPDAVSVLTL LGVLLFVIPA RNTLQSLGAA GRPVFLLGLV 
LACAWLCTWL HPGLVRRGRQ PVRGLLLIYL GALLAAYVAG QRRGLDGVEA RASDRSILAV
LALVGIALAA ADGIPSRARL EVLISRIMCF GAVMALFGIV QYLTHEDYSR YLRLPGFVMW
SPALESVSRG GGTSRVAGTA SHYIEFGVVV AMVVPLALYR TSHAVTKGAR QRAAGALVLT
AAAAPLSVSR TAIIGLGCVL LVQSIVWSWR RRFNVFVWLV IGVGAFGAAV PGVLGTLRSL
FLNYKTDPSY QGRIADYAVA QAYISERPWF GRGPGTFIPA KYFFLDNQYL GTILTSGYVG
LAALVIVMLG GITMAFGVAR RAADAATREL AQALAAMLVA VAAASYSFDS LSFPAFAGLF
YLTLGVTGAL WRLEQRPVPT PAGPAAAAPV QWRDPRGDQP SVAELVPAAR QPAGIA