| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0703 |
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| Symbol | |
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| ID | 5669120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 822083 |
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| End bp | 822649 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641239631 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001505068 |
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| Protein GI | 158312560 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.422936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGACC GCGCCGCGGT CGACAGGGCG TTCGGTCTGG TAAGGGACGA GCTCGGGCCG
ATCGGGATCC TCGTCACCAG CGCCGCCGTC GCCGAGTTCG TGCCGTTCGA GGCACTTGCC
CCCGACGACT GGTCCCGCGC CATCGCGATC AACCTCACGG GGACGTTCAA CTGCCTGCAG
TCGGCCATCG GCGACATGAC CGCGGCGGGC TGGGGCCGCG TCGTCACCAT CTCGTCGGCG
GCGGGCCAGA TCGGCTCCCG GCACCAGGCG CACTACTCGG CGTCGAAAGG CGGAGTGATC
GCGCTGACCA GGACTGTGGC CCTCGAATAC GCGGCCAGAG GGATCACGGT CAACACGGTC
GCGCCGTTCA CGATCGACAC TCCCATGTTG CGTGCCGCGC AGCACGCCAG GCATGTGCCG
GACAGCGAAT CGCTGGCACA GGCGATCCCG GCCGGTCGGC TCGGCACCGG CGCCGACATC
GCCGCGATGT GTGCCTTCCT GTGCTCGGAG GAGGCCAGCT ACACCACTGG CCAGGTCATC
GGTGTCAACG GTGGAGCAGT CACGTGA
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| Protein sequence | MSDRAAVDRA FGLVRDELGP IGILVTSAAV AEFVPFEALA PDDWSRAIAI NLTGTFNCLQ
SAIGDMTAAG WGRVVTISSA AGQIGSRHQA HYSASKGGVI ALTRTVALEY AARGITVNTV
APFTIDTPML RAAQHARHVP DSESLAQAIP AGRLGTGADI AAMCAFLCSE EASYTTGQVI
GVNGGAVT
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