Gene Franean1_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0650 
Symbol 
ID5669067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp756336 
End bp757610 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content73% 
IMG OID641239577 
Productmethyltransferase type 11 
Protein accessionYP_001505015 
Protein GI158312507 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.541697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.369974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGGGC TCACCATGGA CGGGCTCACC GTGGACGGGG TCGCGATGTC GGCGATCACG 
ATGGGTGGCT TCACCATCGA GGAAATCACT GTGGAGCGGA TCCTGCCGCG TGGGCACCGG
GGCCGGGACA ACGCCCCGAT AGAGATCCTG ATCAGGGATG GCGGGGTCGA GATCTACCCG
CCCTCCGCGG AGAACACCTA CTTCGCCCCG CGGACGGAGC GCGACCGGCC GGCTGTACCC
GCGGCACGCG AGTCGACAGA ATACGAGACG GCGTACTACG AGCCGGCCCG TTTCGAGCCG
GCCCGTTTCG AGCCGGCGGA GCACGAGCTG ACCCAGCTCG AGCTGGCGGA GCACGAACCG
GCGGACTATG CGTCGGTGGA ACACGGATCG GCGGGTTCCG AGGTGGCGGA GTACGAACCG
GCGGACGAGG CGGGCGACCC GGCCGAGCAG GTCGATCAGG CCCACCCGGC CACGGTGTTC
GACCGTGCGG CGTACGACTA CGACGCCGAC GTCCACGGTG TGCCGTTCTT CCGTCCGCTG
GGCAAGACCC TGGTGGCCGC GGCCGGCATC TCCCCCGGGG AGAACGTGAT CGACCTTGCC
TGCGGGCGCG GTGCCGTGCT GTTCCCGGCC GCCGAGGCGA CCGGGCCGGC CGGCTCCGTC
CGGGCGTTCG ACCTGGCGCC GACCATGGTC GAGCTGACCG CGGCCGACGT CGCGGCCCGT
CAGCTGCCAT GGGTCGACGT CACGATCGCC GACGCGATGG ACCCGCCCGT CGAGCCGGGC
TCGGTCGACG TCGTCCTCTG CGGGATGGGC CTGTTCCTGC TGCCCGACCC GGTGGCGGCG
CTCGCCCGGT GGCGCGGCGT CCTGCGGCCC GGCGGGCGGC TGGCCGTGAC CGTCTTCGGG
CCGGCGGACC CGCTGTGGGA CCGTCCCGAC TACCCGCTGC GGCTGGCGAC CTCGGTCGGT
GCGGCCGAGC GCCGGCCGGG GCACGCCATC CTGGCGGAGG GCGCGCTCGC CGACGCGCTC
ACCGCGACCG GTTTCACGCT CACCCGGGAC GAGCTGGTCG CCACCGACCT CGTGTTCCGC
GATGTGGCCC ACTGGTGGCG CTGGGCCTGG GGGACGGCGC TGCGGTCCAT GCTGGAGAAG
GTCTCCGACG CCGAGGGCCC GGCGATGATC GAGGAGTTGA CCCGGTGGCA CGCCCCGTCC
ACCGACGCGG GCGGCCTGCA CTGGCGCCCG ACGATCCGCG TCGTCACCGC GGTCGTGACC
GACCCGTCCG CCTGA
 
Protein sequence
MDGLTMDGLT VDGVAMSAIT MGGFTIEEIT VERILPRGHR GRDNAPIEIL IRDGGVEIYP 
PSAENTYFAP RTERDRPAVP AARESTEYET AYYEPARFEP ARFEPAEHEL TQLELAEHEP
ADYASVEHGS AGSEVAEYEP ADEAGDPAEQ VDQAHPATVF DRAAYDYDAD VHGVPFFRPL
GKTLVAAAGI SPGENVIDLA CGRGAVLFPA AEATGPAGSV RAFDLAPTMV ELTAADVAAR
QLPWVDVTIA DAMDPPVEPG SVDVVLCGMG LFLLPDPVAA LARWRGVLRP GGRLAVTVFG
PADPLWDRPD YPLRLATSVG AAERRPGHAI LAEGALADAL TATGFTLTRD ELVATDLVFR
DVAHWWRWAW GTALRSMLEK VSDAEGPAMI EELTRWHAPS TDAGGLHWRP TIRVVTAVVT
DPSA