Gene Franean1_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0560 
Symbol 
ID5668977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp644304 
End bp644507 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content66% 
IMG OID641239487 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_001504925 
Protein GI158312417 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG GCACTGTCAA GTGGTTCAAC GGCGAAAAGG GCTTCGGGTT CATCGCGCAG 
GACGGCGGCG GCCCGGACGT TTTCGTTCAC TACTCGGCGA TCGACAGCGC GGGCTTCCGT
AGCCTGGACG AGAACCAGCG CGTGGAGTTC GATGTCACGC AGGGCCAGAA GGGCCCGCAG
GCGGAGCACG TCCGCCCGGT CTGA
 
Protein sequence
MAQGTVKWFN GEKGFGFIAQ DGGGPDVFVH YSAIDSAGFR SLDENQRVEF DVTQGQKGPQ 
AEHVRPV