Gene Franean1_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0538 
Symbol 
ID5668955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp625110 
End bp625553 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content69% 
IMG OID641239465 
Producthypothetical protein 
Protein accessionYP_001504903 
Protein GI158312395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGTAC CAGCGGATCC AGGCGAGCTC CTCAAGCTCG GCCACCGGGT GGTCGACTTC 
TTCCATGTGG ACTGCGCCGT GACGCTGCGG CGGTTGTACT GCTTCTTCGT CCTGGACGTC
GGCACCCGCA CCGTCCACAT CCTCGGGGTC ACCACCCACC CGGACGGACC GTGGACCACC
CAGCAAGCCC GGAACCTCCT GATGGACCTC GGCGCCCGGG CGGCCGACTT CCAGGTCCTG
GTCCGTGACC GGGCCGGCCA GTTCACCGCA TCGTTCGACG CGGTCCTCGC CGGCGCCGGC
ATCACCGCCG TCAAGATCCC ACCCCGAACC CCGCGGACGA ACGCCTACGC TGAGCGGTTC
GTCCGCACGG TCCGGACCGA GGTCACCGGT CCTGCCTGCG ATGGCTGGGT GGCTATGCCG
CCGAGATCGT TGCCGCGTAC ATGA
 
Protein sequence
MGVPADPGEL LKLGHRVVDF FHVDCAVTLR RLYCFFVLDV GTRTVHILGV TTHPDGPWTT 
QQARNLLMDL GARAADFQVL VRDRAGQFTA SFDAVLAGAG ITAVKIPPRT PRTNAYAERF
VRTVRTEVTG PACDGWVAMP PRSLPRT