Gene Franean1_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0511 
Symbol 
ID5668930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp597383 
End bp597967 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID641239440 
ProductTetR family transcriptional regulator 
Protein accessionYP_001504878 
Protein GI158312370 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGGG ATACCCGCGA GCGCCTGCTG GACGCGGGAC TCGCCCTGTT CGCCGGCAAC 
GGCCTCGCCG GCACCACGGT CTCCGGTCTA GAAGCCCGTG CCGGGCTCCG GGCCGGATCT
GGCTCGTTCT ACCGCCACTT CGCCTCGAAA GAGGCGCTAT TCGAGGCCGT CATCCGACGG
GAACTCGACC GGTTCCGCGC CTCGATCAGC GACGCGGCGC CCGGCGAGTC GGCCATCGCG
GATGTGAAGG TCACACTCGC GCTGGAGTTC CACCAGGCCC TGACGACACT GGACCAGCTC
GGCGGACTTG AGGCGATCAT CAGCCGGGAC GCCCGCGCGA TGGGCGATCT CTTTGACGAG
GTGGAAGGCC TGTTCAACGC CGCCCTCGAC GCCAGCACCG CCCGGCTGGA CCAGCTGATG
GAGTCCGGAC AGATCCCCCG GCGCGACCCC CAGGCCCTCG CTGCAACGAT CAGGAGCGCG
CTCGTCGGAT ATCACCTGAA CACGCAGTCG TTCAGAAGGT CCGCTCGCCG CGTGCCACCG
GCGGATCTGA TCGCCACGCT GATAGACCTG ATCTCCTCCA AATGA
 
Protein sequence
MARDTRERLL DAGLALFAGN GLAGTTVSGL EARAGLRAGS GSFYRHFASK EALFEAVIRR 
ELDRFRASIS DAAPGESAIA DVKVTLALEF HQALTTLDQL GGLEAIISRD ARAMGDLFDE
VEGLFNAALD ASTARLDQLM ESGQIPRRDP QALAATIRSA LVGYHLNTQS FRRSARRVPP
ADLIATLIDL ISSK