Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0511 |
Symbol | |
ID | 5668930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 597383 |
End bp | 597967 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641239440 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001504878 |
Protein GI | 158312370 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCGGG ATACCCGCGA GCGCCTGCTG GACGCGGGAC TCGCCCTGTT CGCCGGCAAC GGCCTCGCCG GCACCACGGT CTCCGGTCTA GAAGCCCGTG CCGGGCTCCG GGCCGGATCT GGCTCGTTCT ACCGCCACTT CGCCTCGAAA GAGGCGCTAT TCGAGGCCGT CATCCGACGG GAACTCGACC GGTTCCGCGC CTCGATCAGC GACGCGGCGC CCGGCGAGTC GGCCATCGCG GATGTGAAGG TCACACTCGC GCTGGAGTTC CACCAGGCCC TGACGACACT GGACCAGCTC GGCGGACTTG AGGCGATCAT CAGCCGGGAC GCCCGCGCGA TGGGCGATCT CTTTGACGAG GTGGAAGGCC TGTTCAACGC CGCCCTCGAC GCCAGCACCG CCCGGCTGGA CCAGCTGATG GAGTCCGGAC AGATCCCCCG GCGCGACCCC CAGGCCCTCG CTGCAACGAT CAGGAGCGCG CTCGTCGGAT ATCACCTGAA CACGCAGTCG TTCAGAAGGT CCGCTCGCCG CGTGCCACCG GCGGATCTGA TCGCCACGCT GATAGACCTG ATCTCCTCCA AATGA
|
Protein sequence | MARDTRERLL DAGLALFAGN GLAGTTVSGL EARAGLRAGS GSFYRHFASK EALFEAVIRR ELDRFRASIS DAAPGESAIA DVKVTLALEF HQALTTLDQL GGLEAIISRD ARAMGDLFDE VEGLFNAALD ASTARLDQLM ESGQIPRRDP QALAATIRSA LVGYHLNTQS FRRSARRVPP ADLIATLIDL ISSK
|
| |