Gene Franean1_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0466 
Symbol 
ID5668887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp551311 
End bp551880 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content67% 
IMG OID641239397 
ProductTetR family transcriptional regulator 
Protein accessionYP_001504835 
Protein GI158312327 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCGGA ACAGACGCGA GGAGATCCTC GACATCGCGC TGGAGATGTT CGCCGAGCAC 
GGCTACCGAG GAACCTCGCT CGATGCCATC GCGCAGCGGG TCGGCCTGAC CCGCCAGGGT
GTTCTGCACT ACTTCTCGAG CAAGGAGAAG CTGCTAACCG AGATCCTCCG GCGCCGCGAG
GAACTCGGCC GCGAGCACCT GCTGGCAGGC CACGCACACG AGGACCTCCC ACACCAGATG
GCCGCCATCG TGGCCCACGA TCACCAGCGG CCAGGACTCA CCCAGGTCTA CGGGGTGCTA
CTGGGCGAAA GCCTCACGCA CGGCCATCCG GCGCAGGAGT ACTTCCGCGG CCACTACGCG
ATGGTCCGTG AACGCATGGC AGCCGACTTC ACTGCGCGGT GGGGTGAGCG CCTTCCCAAC
GGACTGACCC CACGGGCTGC GGCGACGGCC CTGCTGGCCC TCCTCGACGG TATGCAGCAG
CAGTGGCTGC TCGACCGCTC CCAGACCGAC CACTCGGAGA TCATCCGGGA TGTCCTCGCA
GTCCTTCTCG GTCTACCTCC CACGGAGTGA
 
Protein sequence
MARNRREEIL DIALEMFAEH GYRGTSLDAI AQRVGLTRQG VLHYFSSKEK LLTEILRRRE 
ELGREHLLAG HAHEDLPHQM AAIVAHDHQR PGLTQVYGVL LGESLTHGHP AQEYFRGHYA
MVRERMAADF TARWGERLPN GLTPRAAATA LLALLDGMQQ QWLLDRSQTD HSEIIRDVLA
VLLGLPPTE