| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0428 |
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| Symbol | |
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| ID | 5668851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 503841 |
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| End bp | 505589 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641239360 |
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| Product | ABC transporter related |
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| Protein accession | YP_001504799 |
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| Protein GI | 158312291 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG AACGGGTAGT GGGCGACACC CGGCGCCGGG TGTTCCGGCA ACTCCTGCGC
AACCCGCAGG GCGCCGTGTG CCTGGCCTTT CTCGCCCCGG TCGTGCTGGT CGCGGTGACC
AGCCAGTGGC TGGCGCCGTA CTCGCCGACC GAAACCGACC TCGACGCCAC CAACGCCGCG
CCGTTCAGCG ACGGGCACCT GCTCGGCGGG GACAGCGCCG GCCGCGACAT CCTGTCCCGG
CTCATGTGGG GCTCGCGGCA GACCGTCCTG GCGTGCGCCA TCATCCTGGT GATCTCGCTG
GCTGTCGGTG TCACCAGCGG CTTGGTGGCC GGCTTCTATC GTGGGCGGTT CGAGGTCGCG
GCGGGCTTCG TCTCCGACGT GGTCATGTCG CTGCCCGGCA TCGTTCTGCT GATCGCCCTG
TACGCCCTGA CCGGCCCGAA CATCCCGGCC GCGATGGCCG TCTTCGGCCT GCTGATCGCC
CCCACCTACT ACCGCCTGGT CCGCAACGTC GTGCTGGGCG TGCGCAACGA GCTCTACGTC
GACGCGGCCC GCGTGGCCGG CCTGTCCGAC CTGCGGATCG TCGGCCGGCA CGTGCTCTGG
GCCGTACGGG CGCCGGTCAT CATCCAGAGC TCGTTCGTGC TGGCCGCGGG CATCGGCATC
GAGGCCGGCG TGTCCTTCCT CGGCCTCGGT GACCCGGCCG GGGCGTCGTG GGGCATCGTG
CTGCAGAACT CGTTCAACGG CATCTACAAC AACCGGTGGG CCGTGGTCTG GCCGGCGCTG
CTGATCAGCC TCACCATCCT GGCCCTGGTG CTGCTCGGCA ACGCGCTCAG CGACGTCCTG
CAGTCCTCGG CCCGCAGCAA GACACTGTCG CTACGGGCCC GCCGCGCTGC GGTGACGGCG
GCGCAGCAGG TCGAGCCGAC CGAGGACTCG ATCCTCGTCG GGAGCTCCAA CGATGTCGTG
CTCTCCGTCC GGGGACTGCG GGTCGCCTAC CCGATGGCCG GCGGGGAGAT CCGGGAGGTA
GTGCACGGCG CCGACCTGGA TGTGCGGCGC GGCGAGATCC ACGGCCTGGT GGGGGAGTCC
GGCTCCGGCA AGTCGCAGAT CGCCTTCGCC ACCCTGGGCC TCCTCCCGCG CGAGGCGCTG
GTCCTGGGCG GCAGCGTCCT GCTCGACGGC GAGGATCTGC TGGCCGACGT CGCGAAGATG
CGGGCGGCCC GCGGGCGCCG CATCGCGTAC GTTCCGCAGG AGCCGATGTC CAATCTGGAC
CCGTCCTTCA CCATCGGCAA ACAGTTGACG TACGGGCTGC GCGCGGTAAC CACTCTCGAC
GCGAAACAGG CCCGGGAGCG GATCATCAAA TTACTGGTCC GGGTGGGCAT CACCGATCCC
GAGTGGGTGA TGGGCCTGTA CCCGCACGAG ATCTCGGGTG GCATGGCCCA GCGCGTGCTG
ATCTGCGGCG CGGTCGCCGC CGACCCGGAC GTCATCGTGG CCGACGAGCC CACCACCGCC
CTCGACGTCA CCGTCCAGGC CGAGGTCCTC GAACTGCTGC GCGAACTGAG CCAGGAGCGC
GGTCTGGCCA TGATCCTGGT GACCCACAAC CTCGGCGTCG TCGCGGATCT GTGCGACACC
GTGAGCGTGA TGAAGGAAGG AAACATCGTC GAACGCGCCG ACGTCGACGC CATCTTCGAG
TCCCCGCAAC AGGCGTACAC CCGGGAACTG CTCTCGTCCT CCCGCAGCGT CGAGCTGATG
GAGATCTGA
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| Protein sequence | MTAERVVGDT RRRVFRQLLR NPQGAVCLAF LAPVVLVAVT SQWLAPYSPT ETDLDATNAA
PFSDGHLLGG DSAGRDILSR LMWGSRQTVL ACAIILVISL AVGVTSGLVA GFYRGRFEVA
AGFVSDVVMS LPGIVLLIAL YALTGPNIPA AMAVFGLLIA PTYYRLVRNV VLGVRNELYV
DAARVAGLSD LRIVGRHVLW AVRAPVIIQS SFVLAAGIGI EAGVSFLGLG DPAGASWGIV
LQNSFNGIYN NRWAVVWPAL LISLTILALV LLGNALSDVL QSSARSKTLS LRARRAAVTA
AQQVEPTEDS ILVGSSNDVV LSVRGLRVAY PMAGGEIREV VHGADLDVRR GEIHGLVGES
GSGKSQIAFA TLGLLPREAL VLGGSVLLDG EDLLADVAKM RAARGRRIAY VPQEPMSNLD
PSFTIGKQLT YGLRAVTTLD AKQARERIIK LLVRVGITDP EWVMGLYPHE ISGGMAQRVL
ICGAVAADPD VIVADEPTTA LDVTVQAEVL ELLRELSQER GLAMILVTHN LGVVADLCDT
VSVMKEGNIV ERADVDAIFE SPQQAYTREL LSSSRSVELM EI
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