| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0402 |
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| Symbol | |
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| ID | 5668826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 480893 |
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| End bp | 481999 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641239335 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001504774 |
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| Protein GI | 158312266 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.591562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAGCGG GGCGGGACCC GTGTCGGGCA GGCTGGATGG TCATGGTGTG GTCGCTGCTC
TACGCCCTGA CACGCAACAC TCTCGGGCTG ATGCTGCTCC GCGTGCGCGG GGATGCTGCG
AAGGACGTCG AACTCCTCGT CCTGCGGCAC CAGGTGGCGG TGTTGCGACG GCGGGTCCAT
CGTCCGGCAT TGGAACCGGC GGATCGGGTG ATTCTCGCAG CCCTGTCCCG GCTGCTACCC
CGGGCCAGTT GGGACATCTT CTTCGTCACC CCGGCCACCG TGCTGCGCTG GCACCGTGAG
CTCCTCGCAC GAAAATGGAC TTACCCGCGC AAGACGCACG GACGGCCGCC GATCCGCCGG
GAGATCCGTG AGCTGGTTCT GCGTCTCGCG CGGGAGAACC CGACCTGGGG CCACCGCAGG
ATCCAGGGCG AGCTCGTCGG GTTGGGTTAC TCGGTCGGGG TCGCCACCGT CTGGCGGATT
CTGCACCGCG CCGGCGTCGA CCCCGCACCT CGGCGGGCCG ACACCTCCTG GCGCACGTTC
CTACGCGCCC AGGCCTCCGG CATCCTGGCC TGCGACTTCT TCACCGTGGA CACCGTGTTC
CTCCAACGGA TCTACGTGTT CTTCGTCGTC GAACACGCCA CCCGCCGTGT TCATGTCCTC
GGGGTCACGA AGCACCCGAC CACGGCGTGG GTCACCCAGC AGGCACGGAA CCTGCTAATA
GATCTCGAGG AGCGCAGCCA CCGGTTCCGG TTCCTTCTCC GTGACCGTGA CACGAAGTTC
ACGTCCTCGT TCGACGCTGT CTTCACTGGG GCCGGTATCG ACGTGGTGCG CACACCACCG
CAAGCCCCGC AGGCGAACGC GATCGCGGAA CGCTGGGTCG GCACCGCCCG CCGGGAATGT
ACCGACAGGC TGTTGATCGT CTCCGAACGG CACCTGACGT CAGTCCTCGA CAGCTACGCC
GAGCATTTCA ACACCCACCG GCCCCACCGC TCCCTCGGCC AGCACCCACC CGACTCGCCA
CCCGTGGTCG CCCCGACGTC GGAGTCCACC GTCCGTCGCA CACGCATCCT CGGCGGGCTG
ATCAACGAGT ACCGCAACGC CGCCTGA
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| Protein sequence | MSAGRDPCRA GWMVMVWSLL YALTRNTLGL MLLRVRGDAA KDVELLVLRH QVAVLRRRVH
RPALEPADRV ILAALSRLLP RASWDIFFVT PATVLRWHRE LLARKWTYPR KTHGRPPIRR
EIRELVLRLA RENPTWGHRR IQGELVGLGY SVGVATVWRI LHRAGVDPAP RRADTSWRTF
LRAQASGILA CDFFTVDTVF LQRIYVFFVV EHATRRVHVL GVTKHPTTAW VTQQARNLLI
DLEERSHRFR FLLRDRDTKF TSSFDAVFTG AGIDVVRTPP QAPQANAIAE RWVGTARREC
TDRLLIVSER HLTSVLDSYA EHFNTHRPHR SLGQHPPDSP PVVAPTSEST VRRTRILGGL
INEYRNAA
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