| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0377 |
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| Symbol | |
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| ID | 5668801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 449076 |
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| End bp | 452870 |
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| Gene Length | 3795 bp |
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| Protein Length | 1264 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641239309 |
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| Product | ABC transporter related |
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| Protein accession | YP_001504749 |
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| Protein GI | 158312241 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.843886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.12564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCGCG ACGCGGTCAC GGGCGGGAAG GCCGGCTGGC TCCGCCGGCT GACGCGTCAG
TGCTGGCGGC ACCGCGCGGC GCTGATCACC ACCTGGGTCT GTGCGGTGAC CGGGATGACC
ATCAGCGCGC TCACCCCGCT GCTACCCAGG GTGATCATCG ATGATGTGAT CATCGCGCGG
TCCCGGCCGA TGCTGCCCTG GGCCGGGCTG ATGCTGCTGG CCGGGATCGC CGCCTACCTC
CTCCTCATGG TGCGCCGGCG CTGCGGAGCC CGCATGACGC AGGAGGTCAC GCACGACCTG
CGGACGGCGA TGTTCACCTC GCTCACCCGC CTGGACGGCG CCGGCCAGGA CTCCCTGGAG
ATCGGCCAGG TGATCGGCCG CAACACCTCG GATCTGACCC GGGTCCAGAA CCTGCTCACC
CGCACCCCCA CGGCGCTCGG CGGCCTTGTG GCGCTGGCCG TCTCGCTCGG GGCGATGGTG
GTCCTCTCCC CGCGGCTCAC CGCCGTCGCG CTGGTGACCC TGCCGGTGCT CGGCGCGCTC
TCCCTGACCA GTCGCGTGAC GCTGTTCCCC GCCTCCTGGT ACGCGCAGCA GCAGGAGGCG
GCGGTCGCCG GGGTGGTGGC GGCGACGGTG TTCGGCGTGC GGGTCGTCAA GGGCTTCGGG
CAGGAGGAAC GCGAGCTGAA CCGGCTGGAG GCGGTGGCCG CCAGGCTGTT CGCCCACCAG
CTGCGCGTGG TGCGCATCGA CAGCCGCTTC GCGCCGTCGA TCCGGGCCGT GCCGTCGCTG
GGACAGATCG CGATGCTCGC CTTCGGCGGC GCGCTCGCCG TGCACGGCCA GCTCTCGCTC
GGCACCTTCA TCGCGTTCGC CACCTACCTG ACCAGGATCA ACCAGCCGAT CCGCAACCTG
GTCGCGCTGG TGACCCTGGC ACAGCAGGCC CGGGCCAGCG CCGAGCGGAT CTTCGAGGTC
ATCGACACCG GCCCCACCGT CGTCCAGCGC CCGGACGCGG CCGACCTCGA CGTCGCCGAG
GACCCCGCGG ACGGGCCGGC GAGGGTGCGG CCCGCCCAGG CACGGCCGGT GCCGGGTGCC
GCGGCCGTCG AGTTCGACGA CGTCTCGTTC GGCTATCAGG ACGGCCGGCT CGTCCTGGAC
CGCTTCCGGC TGGCGGTGGC GCCCGGCGAG ACGGTCGCGC TCGTCGGCCG CTCCGGCTCC
GGCAAGACCA CCGCCGCGGC GCTGCTCAGC CGCTTCTACG ACCCGTCCGC GGGCGTCGTG
CGGGTGTACG GGCACGACGT GCGCGATCTG ACGCTGACGA GCCTGCGCGG GCTGATCGGC
GTCGTCGGCG ACGACGGCCT GCTGTTCTCG ACCAGCCTGT GGGAGAACAT CGCCTACGGG
CGCCGGGACG CCCCGACCGC GACGGTGCTC GCGGCGGCGC GCGCGTCGCG GGTCGACGAG
TTCGCCACCG ACCTGCCCGA GGGCTACCGG ACCAGGGTCG GCGAACGCGG CCTGACGCTC
TCCGGGGGCC AGCGCCAGCG CGTCGCGATC GCCCGGGCGA TCGTCGCCGA CACTCCCGTC
CTCGTGCTGG ACGACGCGAC GTCCGCGATC GACGCGGAGG TCGAGGCGGA GATCCACCGG
GAGCTGCGGA CGGTCACCTC GACCCGGACG ACACTGCTGA TCGCCCACCG CCGGGCGACG
CTGCGCCTGG CCGACCGGAT CGGGGTCGTC GAGCAGGGCC GGATCATCGA CATCGGCACC
CACGACGAGC TGATCGCGCG CTGCGCCGCC TACCGCGACC TGATCACCCC GGATGTCCCG
GCCGACCCGG CCGACCAGGA CGACCAGGAC GACCAGGACG ACCCGGGTGA CTTTCCGGCC
CCGCGGCCCC GCGAGCCCAC GGAAGCGACC ACACTCACCG AGACCTCGGT GCCGGACATC
CAGGCCGCCG CCGTTCCCGA ACTGGAAGGA CTGCCGGCGG CGCTGCGGCG CCGGGTGCTG
GCGCTGCCGC CCGCCCTGGA CACCCCGGAC CTGGACCAGG AGGTCGTCCG CGCCCGCGAC
CCCCGCTTCG GGCTCGCCGC CATCGGCCGG CTGCTGTGGG CCTCGCTCAC CATCGCCTGG
CTGCTGCTCG TCATCGACAG CCTCACCACG CTGGCGCTGC CCATCCTGAT CCGGCACGGC
ATCGACGAGG GCGTGACGGC CCGCTCGCTG CCGGTGGTAC TCGGCACCGC CGGGGTCGGC
GTCGCCGTCA TCGCCGTCTC GTGGAGCGCG CACACCGCCC AGATCCGGGT GGTCGGCCGT
CTCGGCGCAC GGGTCGGCTA CCTGCTGCGG GTGAAGCTGT TCGCGCACCT GCAACGCCTC
GGCCTCGACT TCTACGAACG CGAGGCCAGT GGACGGGTGA TGACCCGCCT CACCTCGGAC
GTCGACCAGA TCGCCGACTT CATGCGGAGC GACGCCGCGT CATCCGCCGT CTCCGTTCTG
ACGGCGCTGG GCATCGCGAT CGCCCTGGTC GTCATCGACC CCGGCCTCGC ACTGGCCGTG
TTCGCGCTGG TCCCGCCACT CGTCATCGGC ACGGTGTTCT TCCGCGGACG GGCCGCGCGG
GCGCACGCCG ACGCCCGCGA GAGCCTGGCC GAGCTCACCG CCGAGCTACA GGAGAACGTC
ACCGCGATGC GGGTCGTCCA GGCGTTCCGC CGCGAGCCCG ACGCCCTCGA CCGTTACCGC
GACCGCAGCG CCACCTACCG CGACCAGCGG TTACGCGCCG TCCGGTACCT CGCCTACTAC
TTCCCCTACA TCCAGTTGCT GTCGACGGCG GCGAGCGTGG CGGTGCTGCT CGTCGGCTCC
GGGCGGGTAC ACGCCGGGAC GCTGACCATC GGCGCGCTCG CCGCCTACCT GCTCTACATC
GAGCTGTTCT TCGCGCCGAT CCAGGATCTC GCCGAGGTGT TCGACGAGTA CCAGGCGGTC
ATGGTGGCGC TGGGGCATGC CCGGGAGCTG ATGGCCGTCC AACCCGTGCC GGCGGACGCC
CCGCACGCGC GGCCGGTCGA GCGGCTGCGC GGCGAGATCA GCCTCACCGG CGCCGGCTTC
ACCTACCCGG GCTCCGCCAC GGCCGCGCTG CGGGACGTGA ACGTCACCAT CCCCGCCGGC
CAGACGGTGG CGCTGGTGGG CCGGACGGGC TCGGGCAAGT CCACCCTCAC CAAGATCATC
GCTCGCTACT ACGACCTCAC CGAGGGCACC CTGCGCGTCG ACGGCGTCGA CGTCCGCGGG
TACGCGCTGG CCGACTACCG GCGGCGGCTG GGCCCGGTGC CCCAGGAGGC CCATCTGTTC
GCGGGCACGG TCCGCGACGC GATCGCCTAT GGACGTCCCG ACGCACCGGA CGAGCAGGTC
AGAGCCGCCG CGCGCACCGC GGGGGCCGAG GAGATGATCG CCGGGCTGCC CGGCGGCTAC
GGCTACCGGG TGCGCGACCA GGGCCGCAAC CTCTCCGCCG GCCAGCGCCA GCTCCTCGCC
CTCGCCCGCG CCCACCTCGT CGGGCCGGAC ATTCTCCTGC TCGACGAGGC CACAGCGGCC
CTCGACCTCG CCTCCGAGGC CGCGGTCGCC CGCGCCGCGG CCGAGATCGG GCGCTCGCGC
ACCACGGTGG TGGTCGCGCA CCGGCTGACC ACCGCCGCGC GCGCCGACCG CGTGCTGGTG
CTGGACGGCG GCCGTCTCGT CGAGGACGGC ACGCACGGCG CGCTGATGGC GGCCGGCGGC
CACTACGCCC GCCTGTGGGC GGCCTACGCG CACGAACACC GCCTGGAACT CCCGGCGGAC
GCCGCACCGA CTTGA
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| Protein sequence | MSRDAVTGGK AGWLRRLTRQ CWRHRAALIT TWVCAVTGMT ISALTPLLPR VIIDDVIIAR
SRPMLPWAGL MLLAGIAAYL LLMVRRRCGA RMTQEVTHDL RTAMFTSLTR LDGAGQDSLE
IGQVIGRNTS DLTRVQNLLT RTPTALGGLV ALAVSLGAMV VLSPRLTAVA LVTLPVLGAL
SLTSRVTLFP ASWYAQQQEA AVAGVVAATV FGVRVVKGFG QEERELNRLE AVAARLFAHQ
LRVVRIDSRF APSIRAVPSL GQIAMLAFGG ALAVHGQLSL GTFIAFATYL TRINQPIRNL
VALVTLAQQA RASAERIFEV IDTGPTVVQR PDAADLDVAE DPADGPARVR PAQARPVPGA
AAVEFDDVSF GYQDGRLVLD RFRLAVAPGE TVALVGRSGS GKTTAAALLS RFYDPSAGVV
RVYGHDVRDL TLTSLRGLIG VVGDDGLLFS TSLWENIAYG RRDAPTATVL AAARASRVDE
FATDLPEGYR TRVGERGLTL SGGQRQRVAI ARAIVADTPV LVLDDATSAI DAEVEAEIHR
ELRTVTSTRT TLLIAHRRAT LRLADRIGVV EQGRIIDIGT HDELIARCAA YRDLITPDVP
ADPADQDDQD DQDDPGDFPA PRPREPTEAT TLTETSVPDI QAAAVPELEG LPAALRRRVL
ALPPALDTPD LDQEVVRARD PRFGLAAIGR LLWASLTIAW LLLVIDSLTT LALPILIRHG
IDEGVTARSL PVVLGTAGVG VAVIAVSWSA HTAQIRVVGR LGARVGYLLR VKLFAHLQRL
GLDFYEREAS GRVMTRLTSD VDQIADFMRS DAASSAVSVL TALGIAIALV VIDPGLALAV
FALVPPLVIG TVFFRGRAAR AHADARESLA ELTAELQENV TAMRVVQAFR REPDALDRYR
DRSATYRDQR LRAVRYLAYY FPYIQLLSTA ASVAVLLVGS GRVHAGTLTI GALAAYLLYI
ELFFAPIQDL AEVFDEYQAV MVALGHAREL MAVQPVPADA PHARPVERLR GEISLTGAGF
TYPGSATAAL RDVNVTIPAG QTVALVGRTG SGKSTLTKII ARYYDLTEGT LRVDGVDVRG
YALADYRRRL GPVPQEAHLF AGTVRDAIAY GRPDAPDEQV RAAARTAGAE EMIAGLPGGY
GYRVRDQGRN LSAGQRQLLA LARAHLVGPD ILLLDEATAA LDLASEAAVA RAAAEIGRSR
TTVVVAHRLT TAARADRVLV LDGGRLVEDG THGALMAAGG HYARLWAAYA HEHRLELPAD
AAPT
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