| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0374 |
|---|
| Symbol | |
|---|
| ID | 5668798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 446517 |
|---|
| End bp | 447281 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641239306 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001504746 |
|---|
| Protein GI | 158312238 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0448793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00531151 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACGA TCAGCCAGCT GGCGTCGTAC GCCGGCGTCA CCGTGCGCGC GGTGCGGCAC
TACCACGCCA AGGGTCTCCT GCCGGAGCCG GAGCGCGACC ACTCCGGCTA CCGGCGCTAC
GACGCCCACG CCGTCGTCGA GCTCATCAGG ATCCGTACGC TCGCCGACGC CGGCGTGCCG
CTCGCGCGTG TCCGCGAGCT ACTGGCCGCG GGTGAGGAGG AGTTCAACAC TGCCGTCGCC
GACATCGACC AGCGCCTGCG CGCGGAGATC AGGGAGCGGC AACGGCACCG CGAGCGGATC
GCGCAGCTGG CAGCCGGGGA CAGCCTGGCT CTGCCGCCGG AGGCGGTGGC GTACCTCGAC
CGGATGCGTG AGCTCGGATT GCCGGACCTG ATGATCGGGG GCGAGCGGGA CTCCTGGATC
CTGGTGGCCG CCCAACTCCC CGAGCACATG CCGCTCTACA TGAAGGTGAA GCAGCAGCAG
CTCGACGACC CGGCAACGGT CGAACTCTAC CGCGATCTCG CCGCGATGAT CGGCTGGGAG
GCGGACGACC CGCGGGTGGC GGCCGTAGGC GACCGGCTCG TCGCCCTCAT CGAGGCCGAT
GCCGAAGGAT GGGAGAACCA CGACGAGGTG ATGCCCGACG AGCTCGCGCA GCTCCTCGAC
TCGGTCTTCC TCGACTCGGT CCCGATCGCC CGTCGGCTCC TGGAACGGCT CGAGGAGCGC
GGCTGGCGCG GCTGGACCAA GTTCGAACGG ATCCAGCCGA AATAG
|
|---|
| Protein sequence | MLTISQLASY AGVTVRAVRH YHAKGLLPEP ERDHSGYRRY DAHAVVELIR IRTLADAGVP
LARVRELLAA GEEEFNTAVA DIDQRLRAEI RERQRHRERI AQLAAGDSLA LPPEAVAYLD
RMRELGLPDL MIGGERDSWI LVAAQLPEHM PLYMKVKQQQ LDDPATVELY RDLAAMIGWE
ADDPRVAAVG DRLVALIEAD AEGWENHDEV MPDELAQLLD SVFLDSVPIA RRLLERLEER
GWRGWTKFER IQPK
|
|---|
| |