Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0336 |
Symbol | |
ID | 5668760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 402236 |
End bp | 402592 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641239267 |
Product | transcription factor WhiB |
Protein accession | YP_001504708 |
Protein GI | 158312200 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00907394 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAGAA GCCTGACCCC ACCCGTCAGC CTGTCACGCC GTACCAGTAC GACCGGGCTC GTCGGCTCCA CCACCGACGG CGACTGGACG GCCCACGCCG CCTGTCGCGA CCTCGACCCG GATGAGCTCT TCGTCCAGGG AGCGGCCCAG AACCGGGTGA AGACCAGGTG CTTCGGGTGC GTCGTGCGCA CCGAGTGCCT GGCGGACGCC CTCGACAACC ATGTCGAGTT CGGCGTCTGG GGAGGAATGA CCGAGCGGGA GCGCCGCGCG CTGCTCCGCC GCCGTCCGGA CGTCACGTCC TGGCGGAAGC TGCTCGCGGA CGCCCAGGCG GATCACCGCT CCGCGTCCGC CGGCTAG
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Protein sequence | MTRSLTPPVS LSRRTSTTGL VGSTTDGDWT AHAACRDLDP DELFVQGAAQ NRVKTRCFGC VVRTECLADA LDNHVEFGVW GGMTERERRA LLRRRPDVTS WRKLLADAQA DHRSASAG
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