Gene Franean1_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0336 
Symbol 
ID5668760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp402236 
End bp402592 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content71% 
IMG OID641239267 
Producttranscription factor WhiB 
Protein accessionYP_001504708 
Protein GI158312200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00907394 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAGAA GCCTGACCCC ACCCGTCAGC CTGTCACGCC GTACCAGTAC GACCGGGCTC 
GTCGGCTCCA CCACCGACGG CGACTGGACG GCCCACGCCG CCTGTCGCGA CCTCGACCCG
GATGAGCTCT TCGTCCAGGG AGCGGCCCAG AACCGGGTGA AGACCAGGTG CTTCGGGTGC
GTCGTGCGCA CCGAGTGCCT GGCGGACGCC CTCGACAACC ATGTCGAGTT CGGCGTCTGG
GGAGGAATGA CCGAGCGGGA GCGCCGCGCG CTGCTCCGCC GCCGTCCGGA CGTCACGTCC
TGGCGGAAGC TGCTCGCGGA CGCCCAGGCG GATCACCGCT CCGCGTCCGC CGGCTAG
 
Protein sequence
MTRSLTPPVS LSRRTSTTGL VGSTTDGDWT AHAACRDLDP DELFVQGAAQ NRVKTRCFGC 
VVRTECLADA LDNHVEFGVW GGMTERERRA LLRRRPDVTS WRKLLADAQA DHRSASAG