Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0330 |
Symbol | |
ID | 5668754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 396470 |
End bp | 397249 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641239261 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001504702 |
Protein GI | 158312194 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.478372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.100644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCCC TCCGCCGGGT CACGAAGCTG GCCTCCGTCG TCCTCGCGCC GAATCCCGGC CCGATGACCC TCGACGGCAC GAACACCTGG ATCCTGCGGT CACCGGGCGA CGCCGGCTGC GTGGTGGTCG ATCCCGGCCC CGACCACGGC GAGCACCTCG CCCGGGTCGC GGCCGCCGGC CTGGTGCGCA CGATCCTGCT GACCCACGGC CACTCCGACC ACAGCGAGGG CGCCGCGACG CTGCACGCGC TGACCGGGGC GCAGGTGCGC GCCCTCGACC CAGCGCACCG CCTCGGCTCG GAGGGCCTCG GCGCCGGGGA CGTCGTCGCC GCCGCCGGGG TCGAGCTGCG GGTGCTGGCC ACCCCCGGGC ACACCTCGGA CTCACTGTCC TTCGTGCTGG CCGGCGACGA CGAGCACCCG GCCGTGCTCA CCGGCGACAC GATCCTGGGG CGCGGCAGCA CGGTCGTCGC CCATCCCGAC GGCCGGCTCG CCGACTACCT CTCGAGCCTG CGCCTGCTGC GCGAGCTCGG CGACACCACC GTGCTGCCCG GCCACGGCCC CGAGCTGCCA GCGGCCGGGC GGGCGGCCGA GGCCTATCTG GAGCACCGGG CCCGGCGGCT CGATCAGGTG ATCTCCGCGT TAGCCGATCT GGGTGCGTCG GCCGAGCAGG TGACGCCGAT CGACGTGGTC CGGATCGTGT ACGCGGACGT CGACGTGGCA CTCTGGCCGG CGGCCGAGCT GTCGGTACGG GCCCAGTTGG ACTACCTCCG CCCACGCTGA
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Protein sequence | MTALRRVTKL ASVVLAPNPG PMTLDGTNTW ILRSPGDAGC VVVDPGPDHG EHLARVAAAG LVRTILLTHG HSDHSEGAAT LHALTGAQVR ALDPAHRLGS EGLGAGDVVA AAGVELRVLA TPGHTSDSLS FVLAGDDEHP AVLTGDTILG RGSTVVAHPD GRLADYLSSL RLLRELGDTT VLPGHGPELP AAGRAAEAYL EHRARRLDQV ISALADLGAS AEQVTPIDVV RIVYADVDVA LWPAAELSVR AQLDYLRPR
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