Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0264 |
Symbol | |
ID | 5668688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 318335 |
End bp | 320977 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641239194 |
Product | hypothetical protein |
Protein accession | YP_001504636 |
Protein GI | 158312128 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.25272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGCCG CGGCGCCGCT GGAGCGGTTC GCGGACGCAT ACACGGCCGC TACCGGCTGG GGCATCGACC CCACCCGGGC GCAGCAGGAC GTCCGGTGCC CAGCCCACCC GGACGGTTCG CCGTCGCTGT CGGTTGGCAC TGGGCGCGAC AGTCGGGTGC TGCTGACCTG CCAGGCCGGG TGCGACCTGG ACGCGATCAC CGCCGCCGTG GGCCTGGTCC AAGCCGACCT GTTCCCGCCG CGCGACGAGC AGGTGAAGCC GCAGATCGTC GCCTCGTACC CGTACACCGA CGAGCAGGGG ACCTTGCTGT TCACGGTCCA CCGCAAGGAG CCGGGCAAGG ACGGCGCGCG CAAGCAGTTC GTCCAGCAGG CCGCCGACGG ATCGTGGAAG ACCAGGGACA TCCGCAAGCC GCTGTACCGC CTGCCTGACG TCGTCGAGGC GGTCAAGAAC GGCACGACCA TCTACGTCGT CGAGGGCGAG AAAGACGCTG ATCGACTCGC CGGGTGCGGC CTGGCAGCCA CCACTTGCCC ACAGGGTGCC GGGAAGTGGA AGCCGGAGCA CACGACCACC CTCGACGGCG CCGCCGACGT CCGGATCGTC GCGGACGACG ACGGGCCGGG CCACAAGCAT GCGGCCCACG TCGAGGCTGC GCTGCGTCCC GTCGTGCGGT CAGTGCGGAT GCTGCTGCCG GCCGCAGGCA AGGACGTCTC CGACCACCTG AACGCCGGTC ACGGGCTGGA CGACCTGCGC CCGCTCGTCG ACGACGAGGG CCAGGCGCCC GCCGCGGCTC CGCCGGCCGC CACCGATGGT GGGAAGGGTG AGCGGGGCCC GTCGCAGGCA TCCCAGCTCG TCACCCTTGC CCGTGAGCGG TACGAGCTGT TCATGTCCGA GGACGGCCGT CCGTACGGGG TGAAGACGGA CGGGCCGAAC ATCGCCCTTC CGCTGCGCGG CCGGGCAGGC CTGCGCTCCC AGCTCGCCCG GATCTACACC GACACATCCG GCGGGGCGGT GCCGTCTGCG TCCGCGCTGG CGGACGCGAT GACCGTGCTG GAGGGCATCG CACAGTCGGT CGACCCGCGG GTTCCCCATC TGCGGGTTGC TCGCGACGAT GACGGTCGGA TCGTGGTCGA CCTCGGCGCA TCCGACGGCC GGTGCGTGAT CGTCGGCCCG GCCGGCTGGG AGCGTGCCGG GCGGTCGCCG GTGCTGTTCC GCCGGTCGGG CGCGATGAAG CCGCTACCGG ACCCGGTACG CGATGGTGAC GGCCTGGCGA AGCTGCGCGG CCTGCTGAAC ACGACCGAGG CCGGTTTCCG GCTGCTGGTG GCGTGGCTGG TGGCCGCGTT CATCCCGGGT ATCCCGCACC CGATCCTGAC GTTCCGGGGT GAGCAGGGCA CCGGCAAGTC GTACTCGGCG AAGATGGTCA TCGGGATCGT CGACCCATCC GGCGCGCCGA AGCGGACCGC GCCGCGCGAC ATCAAGTCGT GGGCCACGCA GGCGTTCAAC TCGTGGGCGC TGTGCCTGGA CAACGTGTCG ATCGTCCCGG ACTGGTTGTC GGACGCGCTG TGCCGCGCGG TCACCGGTGA CGGCATCGTC GACCGGGCGC TCTACACCGA TGACGACGTG GTGGTGCTGG AGTTCCGCCG GGTCCTGGCC ATGACGACCA TCGACGCCGG GGCGCTGAAC GGCGACCTCG CCGAACGGCT CCTGACCATC GAGCTGCGCC TGATTCCCGA CAGCGCGCGG CGCGAGGAAG CCGACCTCGA CGCCGCCTAC GCGGACGCGC ACCCAGCGAT CCTGGCGTCC CTGTTCGACC TGCTCGCCAA GGTCCTGAAG GCGCTGCCGG ATGTCGTACT GACCGAGCGT CCGCGGATGG CGGACTTCGC CCGGGTCCTG GCCGCGGTCG ACAAGGTGAC CGACTGGAAG ACGCTGGAGT CCTACAAGGA CACAGCGCGG GACGCGGTCG CCGATGTCCT CGATGGCGAG CCGTTCGCAA AGGCCGTCGT CGAGCTGGTC GACCGGTCCG GGCCGGATGG CCTGTTGCTG ACGGCGTCGG AGTTGCTGGA GAAGGTGGCG ACCCCGGACC GGCTGCCGAA GAAGTGGCCG AAGGACGCAA CCCGTGCCAG TGGGCAGCTC AAGCGGCTCG CACCCGCGCT GCGCACGATC GGGATCGACG TCGACGACTC CCAGCGCGGG CCGAAGCCGA AGAAGCAGCG CCTGCTCCGG CTGACGGCAT CCACAGAGAG AAGGTGCGAA ACAGCGGTCC CAGCGTCCCC CGACGGCCAA AACGGGCCGC TGACCTGGGA AAACAGGGGG GACGCTAGCG AATCCTTCAC AGCGTCCCCC CTCGACGCAT GGGGGGACGC TGTGGACGTC GAGGGGGACG CTGACCCGTT CGTAGCGTCC CCCCACGACA CCGGCTCTGA CCTGCACGAA TACGGCAGGG GGGACGCTGG GACCGCTGGG GACGCTGAAA TGCACCCACT CTCTGAACAG GTCACCACCG GCGTCGTGCT GCACATCGCT GACCACGCGC CCACCGACAT CCCGCCCGGC GCCGCCGGAC CGTGCGTCAC CTGCCACCGG ACCACCCGCC GCTACGGCGC CGGTGGCAAC CCCCGGTGCC CGCGATGCCG GGAGGCGTCG TGA
|
Protein sequence | MTAAAPLERF ADAYTAATGW GIDPTRAQQD VRCPAHPDGS PSLSVGTGRD SRVLLTCQAG CDLDAITAAV GLVQADLFPP RDEQVKPQIV ASYPYTDEQG TLLFTVHRKE PGKDGARKQF VQQAADGSWK TRDIRKPLYR LPDVVEAVKN GTTIYVVEGE KDADRLAGCG LAATTCPQGA GKWKPEHTTT LDGAADVRIV ADDDGPGHKH AAHVEAALRP VVRSVRMLLP AAGKDVSDHL NAGHGLDDLR PLVDDEGQAP AAAPPAATDG GKGERGPSQA SQLVTLARER YELFMSEDGR PYGVKTDGPN IALPLRGRAG LRSQLARIYT DTSGGAVPSA SALADAMTVL EGIAQSVDPR VPHLRVARDD DGRIVVDLGA SDGRCVIVGP AGWERAGRSP VLFRRSGAMK PLPDPVRDGD GLAKLRGLLN TTEAGFRLLV AWLVAAFIPG IPHPILTFRG EQGTGKSYSA KMVIGIVDPS GAPKRTAPRD IKSWATQAFN SWALCLDNVS IVPDWLSDAL CRAVTGDGIV DRALYTDDDV VVLEFRRVLA MTTIDAGALN GDLAERLLTI ELRLIPDSAR REEADLDAAY ADAHPAILAS LFDLLAKVLK ALPDVVLTER PRMADFARVL AAVDKVTDWK TLESYKDTAR DAVADVLDGE PFAKAVVELV DRSGPDGLLL TASELLEKVA TPDRLPKKWP KDATRASGQL KRLAPALRTI GIDVDDSQRG PKPKKQRLLR LTASTERRCE TAVPASPDGQ NGPLTWENRG DASESFTASP LDAWGDAVDV EGDADPFVAS PHDTGSDLHE YGRGDAGTAG DAEMHPLSEQ VTTGVVLHIA DHAPTDIPPG AAGPCVTCHR TTRRYGAGGN PRCPRCREAS
|
| |