| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0184 |
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| Symbol | |
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| ID | 5668609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 222282 |
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| End bp | 224009 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641239113 |
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| Product | hypothetical protein |
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| Protein accession | YP_001504557 |
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| Protein GI | 158312049 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00494452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACGA CTGTCCCACG TCGGCACCGC GCTCGCCGCC GCGACCGGTA CCTTCCGGGG
ATCGTGAACA GCGCGGGAGT AGCAGGTCCG GCAGGACGGG CGCGCGGCCC GGCACGCTGG
TACGCGGCCC TGCGAGGACG GCCGCTGATC GTCCGGTGGG TTGTCAGCCG GGCCATGCTG
CTCACCCTGG CGCTGGCCGG CCAGGTGTTC GGCGCGCAGC AGAGCGTTCT CGGTGATGTC
GATCTCTACC GGGAGTGGGG CCACACGCTC GTCGGTGACG GGACGGTGCC CGGGGACGAG
AAATGGCAGT ACCCGCCGGG CGCGGCGGTC GTCCTGGCGC TGCCCGCGGT GCCGCGCGAG
CTGGCCGGCG TCCCGTATGA GGTGTCCTTC TACCTGCTGA TGCTCGTCGT GGACGCGGTG
CTCACCCGGG CGCTGGCCCG CCGCTCACCC GCGGCAGCCC GGTACTGGCT GCTGGCCACG
CTCGCCCTCG GCCCGGTGAT GCTGACCCGG TTCGACCTGG TGCCGGCGGC CGCGGCGCTG
GCCGCGGTCC TCGCCCTGGA CGGCTCCGCG CCCGGTGGCG CCCATGGCTC CGGTGACGCT
GAGCCTCCTG ATGGCGCTGG TCGGCCGGGG CACTCCCGGC GCCTCCGCCC GTTCAGTTCT
TTCGGTGCGC TTGGTTCACT CGGTCGTTTC GGTGGCTGGG TGGTGCTGGG CGTGGCGGTG
AAGGTGTGGC CCGGGTTGCT CCTGGTGGCC CTGGGACGAC GCGGGCTGAC GCGCCCGGGC
TCGCCGGTGC TGGGCCGGGT GGCGCGGATC GTGGCGGGCG CGGGTGTGAC GGCGGCCGTC
CTGGCCGCCA TCCTCGTGCT CGCCGGTTGG TGGCGGGGCG CGCTGGGGTT CCTGGACGCG
CAGAGCGCCC GCGGCCTGCA GATCGAGGCG GTGCCGGCCA CCCCGTTCGT CGTGGCGCGG
ATGCTCGGGA TCGGCTCCGC CCCGGAGTAC TCCTACGGGT CACTCCAGTT CGACGGCGGG
CTCGCCAGGG CAGTGGCGAC GGCCTGCTCG CTCGCCGAGG TGATCGTGAT CGCCGCCGCA
GTCCTGTGGT GGTGGGCGCG GCGGTCCCCT GGTCGGGCCG TGGACGCCTC CCCCCGGCCG
GGCGGGGACG GTTCGATGGA CACGGAGGGC ACATCGTCGG TTGCCGGGCG TGGCCTCGCG
CTGGTCCTGC TGATTGTGAT CACCTCGCGG GTGCTCAGCC CGCAGTACCT GGTCTGGCTG
CTCGTCCTCG CCGCCGCCGT CCGCCCGTCC ACCGCCGGCG CCGAGCGTGT GCGGGCCGAG
TCATCGGACC ACTCCGGGAG CACAGGCGGC CGGCTCGGGT GGTCCGGGTG GCGTGGGCGG
AAGGTCGACG CGGCGGGGCT GCTCGCCGTC TGCGCTGTGC TGTCGCAGGT TGTCTACCCG
TGGCGCTACA ACGACGTCGT GCAGGGGCGG GTCGTCGGCG GGCTGCTGCT GGTCGCGCGC
AACGCCGTGC TCGTCACCGC GGCCTGGTAC GCGCTTCGGG CCGCGGCGCG GGAATCGTCC
GGCGACGGAC AGTCGTCCGG CGACGGACCG CCGGCACAGT CGCCGCCGAC ACCACTGCCG
CCAACACCAC CACCAGGGCA GCGCCGAGCA GCGGGTCGGC CCGGCCGAGC AGTCGCCAGG
TGGCGGCGAG CGGCGACAGC GTCGCGAGGC ACAGCCAAAC CGACGTGA
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| Protein sequence | MATTVPRRHR ARRRDRYLPG IVNSAGVAGP AGRARGPARW YAALRGRPLI VRWVVSRAML
LTLALAGQVF GAQQSVLGDV DLYREWGHTL VGDGTVPGDE KWQYPPGAAV VLALPAVPRE
LAGVPYEVSF YLLMLVVDAV LTRALARRSP AAARYWLLAT LALGPVMLTR FDLVPAAAAL
AAVLALDGSA PGGAHGSGDA EPPDGAGRPG HSRRLRPFSS FGALGSLGRF GGWVVLGVAV
KVWPGLLLVA LGRRGLTRPG SPVLGRVARI VAGAGVTAAV LAAILVLAGW WRGALGFLDA
QSARGLQIEA VPATPFVVAR MLGIGSAPEY SYGSLQFDGG LARAVATACS LAEVIVIAAA
VLWWWARRSP GRAVDASPRP GGDGSMDTEG TSSVAGRGLA LVLLIVITSR VLSPQYLVWL
LVLAAAVRPS TAGAERVRAE SSDHSGSTGG RLGWSGWRGR KVDAAGLLAV CAVLSQVVYP
WRYNDVVQGR VVGGLLLVAR NAVLVTAAWY ALRAAARESS GDGQSSGDGP PAQSPPTPLP
PTPPPGQRRA AGRPGRAVAR WRRAATASRG TAKPT
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