Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0166 |
Symbol | |
ID | 5668591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 198508 |
End bp | 199860 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641239095 |
Product | hypothetical protein |
Protein accession | YP_001504539 |
Protein GI | 158312031 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00671267 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.080695 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAGT CGGACGGACT CCCACCGCTG GCAGCGCCGG CATTCGACGA GATCTTCATC CCCCCGGCCC GCACTCCCCC GGACGACCGG CCCGAGGACT ACCCGGCCGA GCCCCCGCGC CGGCAGGCGC CGGAGGACAC GGCCGAGCAC CCAGAGCTCC CCAGGCGCCT CCGCGCGGCC GCCCCGCCGC CCCCAACCCC CGCCCCAGCT GGCGATATCC GCTCCGCCGA CGAGGTCAGC TCCGCGGAGG AGATCCGCTC CGCGGGCGAG CGCGAGGTGG CGGGGGCCAC CGCTGACCGC AGGCAGTTCC ACCGGTGCGC GGGGGCCGCC GTCGTGGGCG CGCTGCTCGC CCAGAGCCAG ATCATGGAGG TGGCGGACGT GCTCGCGGCC AGCCCGGTAC AGCTCGCCCT CGAGCGCGCG AACGAGGCGC TGGGCGAACT GGTGAACACC CACGAGGTGG TCCCCCCCGC CCACGTGCGC GCGCGCACGG CCCGGCTCCG GCGCGGCCTG GAGCGGCTCG GCCGCCGGTC CATGGCAACG GAGGACTCCC GCCGGCTGCT CGTGCTCGCC GGCCGGGTCG CGGTGCTCGG CGCCGACGCG GCCTTCAAGC AGGGCGACGT CGCCTCCGCC CGCCAGCTCA CCGCCGACGG CTACGCGGCC GGCCTCGAGG CCGGCGACGG CCCGCTGTGC GGCTCCGCGC GCGAGGTCGG GGCCGTCAAC GAGTTCTACG GCGGGCGTCC CGACGAGGCC CTGCGCCTCG CCCGGGACGG CCTGCGGCAC GTGGGCTCCG GCCCCGTCCG GGCCCGTCTG GTGTGCCAGG AGGCCCGCGC GCTGGCGGCG ATGGGGGACG TCCGCGGCGC GGCCGGCAGC CTCGACCACG CCTACGACCT GGCCGACGCC ATCCCGGCGG ACCGCTGGGG CCGGCCTGGA CCCAGCTTCG ACACGTTCCA CCCGGTCGAG GTCTCCTACA ACGCGACCAC CGCGCTCTGC CTGCTCGGCC GGCCGCGTGC CGCCCAGGAG CACGCCGAAC TGGCGCTGCC GAAGCTGGAC GCGATGAATG CGCCCGGCTT CCGGTCGGTG ATCCGGTTCG ACCTCGCCCT GGCGATGGCC CGCCAGGGCC GGCTCGAGCT CGACGGCGTC TGCGAGCTCG CGACCGACGC GATCGGCATC TCCTGGGGGC GCACGGTCGC CTCGGTCTCC AGCCGGGCCG ACCAACTGCT CGCCGCCACC ACCCCGCACG GCGAGGTGCG ACAGGTCAGG GAGCTGGCCG CATTCGTGCG GGAATGGCAG CGCTCGGCAT CGGGCCAGCG CCCTGATCCC GGCGCCGTCC CGGCACCGAC GCTGGATCTC TAG
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Protein sequence | MPQSDGLPPL AAPAFDEIFI PPARTPPDDR PEDYPAEPPR RQAPEDTAEH PELPRRLRAA APPPPTPAPA GDIRSADEVS SAEEIRSAGE REVAGATADR RQFHRCAGAA VVGALLAQSQ IMEVADVLAA SPVQLALERA NEALGELVNT HEVVPPAHVR ARTARLRRGL ERLGRRSMAT EDSRRLLVLA GRVAVLGADA AFKQGDVASA RQLTADGYAA GLEAGDGPLC GSAREVGAVN EFYGGRPDEA LRLARDGLRH VGSGPVRARL VCQEARALAA MGDVRGAAGS LDHAYDLADA IPADRWGRPG PSFDTFHPVE VSYNATTALC LLGRPRAAQE HAELALPKLD AMNAPGFRSV IRFDLALAMA RQGRLELDGV CELATDAIGI SWGRTVASVS SRADQLLAAT TPHGEVRQVR ELAAFVREWQ RSASGQRPDP GAVPAPTLDL
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