Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0160 |
Symbol | |
ID | 5668585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 189925 |
End bp | 190884 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641239089 |
Product | hypothetical protein |
Protein accession | YP_001504533 |
Protein GI | 158312025 |
COG category | [R] General function prediction only |
COG ID | [COG3380] Predicted NAD/FAD-dependent oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.443199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.129694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGAAGG TCATCGTTGC AGGTGGCGGG ATCGCGGGTG TCGCGTGCGC GCGCGAGCTG CGGGCGCGGG GCATCAGTGT CGAGGTGCGC GACCGCGGCC GGGTGATCGG CGGCCGGATG GCCTCGCGCT GGATCGACGG CCGGATCGTC GACGCCGGGG CGTCGTACTT CACCGCGCGC AGCCCCGAGT TCCTCGAGGT CGTCGACGAT TGGCTCATCC GTGGTCTCGT CCGCCCCTGG ACGCACCGCT TCCCGGTGAT CGACGGCCCG TCGGCGACGC TGTCCGAGCC GGTGCCGGGC CCACTGCGGT ACGCCGCCCC GCACGGCATC CGCTCGCTGG TCGCCGATCT CGCCACCCGC GGCGGCCTGC GGGTCTCGCA GTCGTCCCCG ATCGGCATGG TGCGCCCGGG GCCTGTGGTG GACGGCGAAC CGGTGGACGC CGTCGTCCTG GCGATGCCCG ATCCACAGGC CCTGCGCCAC CTCGACCCCG ATCTCGACAC GGAGCGCACG GAGCTCATCG GACGGCGGTG GTCCCCGGCG CTCGCCCTGC TCGCGGGTTG GGAGGCCCGA GGGTGGCCCC CGCTGGACGG CGCCTTCGTC CACGGCGACC CGACCGTCGT CTGGATCGCC GATGACGGCC GCCGGCGCGG CGACAACGCG CCCGTTCTGG TGGCGCACTC CACCGCGGAG TTCGCCGCCG GCCGGCTGAC GGACCCGCGA GCGGCCGCCG GCGACCTCAC CGCGGCCCTC CGCCGGCTCC TCGGCATCCC CACCGACCCG GTCTGGACAT ACGTCCAACG CTGGACGTTC GCTCGCCCCG AGCAACCACG GGAGCGGACC TACTTCCTCG GCCAGGCTCG GGTGGGGCTG GCCGGCGACG GCTGGGGCGA GCCCCGGGTC GAGTCCGCCT GGCGGTCGGG CACCGAGCTC GCCCGGGCGA TCGCCGAGGC CGTCGGGTGA
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Protein sequence | MAKVIVAGGG IAGVACAREL RARGISVEVR DRGRVIGGRM ASRWIDGRIV DAGASYFTAR SPEFLEVVDD WLIRGLVRPW THRFPVIDGP SATLSEPVPG PLRYAAPHGI RSLVADLATR GGLRVSQSSP IGMVRPGPVV DGEPVDAVVL AMPDPQALRH LDPDLDTERT ELIGRRWSPA LALLAGWEAR GWPPLDGAFV HGDPTVVWIA DDGRRRGDNA PVLVAHSTAE FAAGRLTDPR AAAGDLTAAL RRLLGIPTDP VWTYVQRWTF ARPEQPRERT YFLGQARVGL AGDGWGEPRV ESAWRSGTEL ARAIAEAVG
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