Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0124 |
Symbol | |
ID | 5668549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 148981 |
End bp | 149508 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641239052 |
Product | peptidylprolyl isomerase |
Protein accession | YP_001504497 |
Protein GI | 158311989 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.671624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGG AGCTGTACGC GACGGTGCGC ACGACTCAGG GCGACATCGA GATCAGGTTG TTCCCGGATC ACGCGCCGAA GACGGTCAAG AACTTCGTCG GGCTCGCGAC CGGGTCCCGG GAGTGGACCG ACCCCGCGAC CGGCGAGAAG AAGACCGGTG TCCCGCTGTA CAGCGGGACG ATCTTTCACC GGGTGATCCC GAACTTCATG ATCCAGGGCG GCGACCCGCT CGGCAGCGGT CGGGGTGGCC CCGGCTACCA GTTCGTCGAC GAGTTCCACC CCGACCTGCG GTTCGACCGT CCGTACCTGC TCGCGATGGC GAACGCGGGC CCGGGCACGA ACGGCTCCCA GTTCTTCATC ACCACGGCGG CCACCGACTG GCTGAACCGC AAGCACACGA TCTTCGGCGA GGTCACCCGG GGGACGGACG TCGTCGACAA GATCGGTAAG ACGCCGACCG GCGCTCAGGA CCGCCCCAAG ACCGACGTGG TGGTTCAGGA GATCGTCGTC GAACGCCGCC CGGCCTGA
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Protein sequence | MAEELYATVR TTQGDIEIRL FPDHAPKTVK NFVGLATGSR EWTDPATGEK KTGVPLYSGT IFHRVIPNFM IQGGDPLGSG RGGPGYQFVD EFHPDLRFDR PYLLAMANAG PGTNGSQFFI TTAATDWLNR KHTIFGEVTR GTDVVDKIGK TPTGAQDRPK TDVVVQEIVV ERRPA
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