Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0122 |
Symbol | |
ID | 5668547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 146934 |
End bp | 147740 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641239050 |
Product | hypothetical protein |
Protein accession | YP_001504495 |
Protein GI | 158311987 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00259509 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGCG GCAGACTCGT GGCCGAATTC CGTCGGCGGC CCCGGTTATG TTCCCAGCGC TTCGTCCTGT TCGTGAACGC GCCGATCGGC CTGCTTGTGG CCCTGCTGGC GCCGCGGGTC CTGACCGAGG CACCCCGGCG GACGGGAACG TTCGACCTCC CCGGCGCGGT CGGGGTCACC GCCGGTGTGA CGGTCGGCGT CTACGGCCTG ACCAGGACGA CCACCCACGG ATGGTCGGAC GCGCTGACTC TGCTCTGCCT GATCGGCGGG GTCGCGCTCC TGGGGCTCTT CCTCCTCCGG GAGGCGATGT GCCGCGAGCC GCTGGTTCCG CTGTGGCTGT TCCGGAACCG GGATCGCGGC GGTGCCAATC TGATCATTCT CGCCGTCGCC GTGGCGATGT TCGGCGTCTT CTACTTCCTC ACCCTGTTCG TGCAGGGCGT GCTCGGCTAC AGCCCGCTCT TCTGGCTGTC GACCCTGTCG GCGGACTCGT CCTACCCCAC GTTGCTGCTG CCCGCGACGG TGCTGTTCGG CTTCGGGGTC GGGATCTCGT TCGTCCCGCT CACCGCCGTC GCGGTTGCCG GCGTGGACGC GGCGGACGCG GCCAGCGCCG CCGGGTCGGC CAGGCCCTCG CCCGCCGCGA TCATCGAGGC CTCGGTCGCC GGGTACGCCG ACGCCCTCCT GGTCGGGGCG GGGATGTGCC TGGCAGCGAT GCTCGCCGGG CTGTTCATGA TCACGCCGGC CGCCGGCCGG CTGGAGTCGG CCGGTGCAGC CGAGGGCGCA TCCCAGCCCG TTCCCGGCCA CGTCTGA
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Protein sequence | MAGGRLVAEF RRRPRLCSQR FVLFVNAPIG LLVALLAPRV LTEAPRRTGT FDLPGAVGVT AGVTVGVYGL TRTTTHGWSD ALTLLCLIGG VALLGLFLLR EAMCREPLVP LWLFRNRDRG GANLIILAVA VAMFGVFYFL TLFVQGVLGY SPLFWLSTLS ADSSYPTLLL PATVLFGFGV GISFVPLTAV AVAGVDAADA ASAAGSARPS PAAIIEASVA GYADALLVGA GMCLAAMLAG LFMITPAAGR LESAGAAEGA SQPVPGHV
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