| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0118 |
|---|
| Symbol | |
|---|
| ID | 5668543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 140647 |
|---|
| End bp | 141792 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641239046 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001504491 |
|---|
| Protein GI | 158311983 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG GCGCCCTGAC CGGAACGCAG GCGGACCAGA CCCCGGAACG AACCGGCGCG
CCGGCGATCG AGCGGCACAG CGGACCTACG GTGGGCACAG CAGCCGACAT AGTGGTCGGG
ATCGACGGCT CCCCCGGCTC CGCGGCGGCG TTGACCTGGG CGGTCGCCGA GGCCAGCCGG
CGCGGCCTGC GGGTGCGCGC CGTCCTCGGG TCCTGCGCCG ACGAGCAGCC CACCGCTGTA
CGCAGGTCCG CCGACGCGAT CGCCGGGCCG CACGACGAGG CCACCTTGGC CTTCGCGGCC
AGCCACCTCC TGCATGAGAC GATCGGCGCC GCCCCCATCC CCGCGGGACT CGAGGTCCTC
GAGGAGGTGG TGGACGCTCC TGGCGCCGAG GCCCTGCTCA CCGCCGGCCG GGACGCCGCC
ATGATTGTCG TCGGAGCACG CGGGCGCGGG CTCCTGCACC GCCTGCGGCT CGGATCGGTG
AGTACGTCCG TGGCCGTCCA TTCCCCCGTG CCAGTGGTCG TCGCGCGACT CCCCCGTTCG
GGGGATGCCG GCGAGCCCGA TGCGGACGGC CTCGCCGGTG CCGGGCCGGT CGCCGACGAG
CGGCTGAGCC CCACGAGCGC ACCGAGGCAG GGCACGCCGC ACCGGCGGCC GGTGGTCGTC
GGGGTCGACG GCTCACCCAA CTCGCTGGCC GCGCTGCGGT GGGCCGCGGT CACGGCGGCA
CTGCGTGGGG CACCGCTGCA TGTCATCCAC AGTTGGCTCG CCGCGGTCCC CCTCCCGTTC
GCCGAGACGT CCGGGGAGAT CGTGCAGGCG CTCGAAGGCC AGGCGCGGGC CGTGCTGGAC
GAGTCCATCG AACAGGTCCT CGGCCCGATC CCCGGCGGCG AGCCAGGGGA GCCCGCCGAG
CCGGGCGGTA CGGAGCCCGC CGTGCTCCGG CTCGCCGCTC CGGCACCCGG CTCCGGGGAG
ATCGACGTCT ACCGTCAGCT GATACCCGCC TCTGCCACCC GGGCCCTCCT CGAGGCCAGC
CACGACGCCG ACCTGCTGGT CGTCGGAGCC CGGGGCAAGG GCGGATTCGC CGAGCTCCTC
CTGGGCTCGG TCAGCCACCA GACGATGCTG CACTCCGCCG CCCCCGTAGC GATCATCCGG
GCCTGA
|
|---|
| Protein sequence | MTDGALTGTQ ADQTPERTGA PAIERHSGPT VGTAADIVVG IDGSPGSAAA LTWAVAEASR
RGLRVRAVLG SCADEQPTAV RRSADAIAGP HDEATLAFAA SHLLHETIGA APIPAGLEVL
EEVVDAPGAE ALLTAGRDAA MIVVGARGRG LLHRLRLGSV STSVAVHSPV PVVVARLPRS
GDAGEPDADG LAGAGPVADE RLSPTSAPRQ GTPHRRPVVV GVDGSPNSLA ALRWAAVTAA
LRGAPLHVIH SWLAAVPLPF AETSGEIVQA LEGQARAVLD ESIEQVLGPI PGGEPGEPAE
PGGTEPAVLR LAAPAPGSGE IDVYRQLIPA SATRALLEAS HDADLLVVGA RGKGGFAELL
LGSVSHQTML HSAAPVAIIR A
|
|---|
| |