| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0103 |
|---|
| Symbol | |
|---|
| ID | 5668528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 122399 |
|---|
| End bp | 123010 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641239031 |
|---|
| Product | cyclase/dehydrase |
|---|
| Protein accession | YP_001504476 |
|---|
| Protein GI | 158311968 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5637] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCA CCGTGCAGGA ATCGATCGAT GTGGCCGTCC CGGTCCGGAC CGCCTACAAC
CAGTGGACCC AGTTCGAGTC GTTCCCGAAC TTCATGGAGG GGGTCGAGTC CATCCAGCAG
ACGGACGACA CCCACACCCA CTGGCGGATC AAGGCCGGTG GCACCGAGCG CGAGTTCGAC
GCCACGATCA CCGAGCAACT CCCGGACGAG CGCGTCGCGT GGAAGAGCAC CGAGGGGAGC
CGTCACGCCG GCGTGGTGAC GTTCCACCGG CTGGCCGACG ACGCCACCCG GGTGACGGTG
CAGATGGACT GGCAGCCCGA GGGGCTCGTG GAGAAGGCCG GCTCGGTGCT GGGCGCCGAC
GACCGCCGGG TGAAGGACGA CCTCAAGCGG TTCAAGTCCT TCATCGAGGA GCGCGGCCAG
GAGACCGGGG CCTGGCGGGG TGACGTATCG CGCCCGGACG CCGCCGGTCA GTCCGGTCAG
TCCGGTCAGT CCGGTCAGCC CGGCCGGTTG GGTTCGTCGG AAGCCCCCGG CACGGGCGGC
GCCGGTGGTC CGCAGCGGGA TCAGGGGACC GGCGGGGCGA CGTACTCGCA GCCCGGCGGC
GGCGAGTTCT GA
|
|---|
| Protein sequence | MTSTVQESID VAVPVRTAYN QWTQFESFPN FMEGVESIQQ TDDTHTHWRI KAGGTEREFD
ATITEQLPDE RVAWKSTEGS RHAGVVTFHR LADDATRVTV QMDWQPEGLV EKAGSVLGAD
DRRVKDDLKR FKSFIEERGQ ETGAWRGDVS RPDAAGQSGQ SGQSGQPGRL GSSEAPGTGG
AGGPQRDQGT GGATYSQPGG GEF
|
|---|
| |