Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0098 |
Symbol | |
ID | 5668523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 115711 |
End bp | 117012 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641239026 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001504471 |
Protein GI | 158311963 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTGGG ACTTCGAGAC CGAACCCGAG TACCAGGCCC AGTTGGACTG GGCTGACAAG TTCGTGCGGG AGGAGGTCGA GCCCCTCGAC ATGGCTTGGC CCGACCTGCA GTTCGTGCCG CGCGGCGAGA CGCTGCAACG GGTCATCGAC CCGCTGCGGC AGCAGGTCAA GGACCACGGC CTGTGGGCGA CCCACCTGGG CCCGGAGCTC GGCGGCCAGG GGCACGGGCA GCTCAAGCTG TCGCTGCTCA ACGAGATCCT GGGCCGTTCC AGCTGGGCGC CGATCGTCTT CGGGTGCCAG GCGCCGGACA CCGGCAACGC CGAGATCATC GCGCACTACG GCACCGAGGC CCAGAAGAAG CAGTACCTGC AGCCGCTGCT GGACGGCGAG TGCTTCTCGT CGTACTCGAT GACCGAGCCG CAGGCGGGCT CGGACCCGAC CCAGTTCACC TGCAGCGCGG TGAAGGACGG CGACGGGTGG GTGATCAACG GCTGGAAGTT CTTCTCCTCG AACGCCAGCA CCGCGCGGTT CGTCATCGTC ATGGTGGTCA CCAACCCCGA TGTCAGCCGG TACCGGGGCA TGTCGATGTT CCTGATCCCG ACGGACACTC CGGGCATCAA CATCGTCCGG AACGTGGGTC TGCCCGGTGA GCCGCTGGGC GAGGGGCACC ACGCCCTCAT CCACTACGAG GACGTCCGCG TCTCGGACGA CGCGCTGCTC GGCGGCGAGG GCCAGGCGTT CGCCATCGCG CAGACCCGCC TCGGCGGCGG GCGGATCCAC CACGCGATGC GCACGATCGG CCTGGCGAAG AAGGCGCTGG ACATGATGTG CGAGCGCGCG CTGAGCCGCA GCACGCAGGG CAGCCTGCTG GCCGACAAGC AGTTCGTCCA GGGCTTCATC GCCGACTCGT ACGCCCAGCT GGCGCAGTTC CGGCTGTTCG TGCTCTACAC GGCGTGGTCG ATCGACAAGC ACAAGGACTA CCGCAAGGTC CGCAAGGACA TCGCCGCGGT CAAGGTGGTC ATGCCCGCGG TCCTGCACGA CATCGCCTCG CGGGCGCTGC AGGTGCACGG CGCGCTCGGC GCGAGCAACG AGATGCCGTT CCACCAGATG GTGATGGGCT CGTTCGTGAT GGGCCTCGCC GACGGGCCGA CCGAGGTCCA CAAGGTCACC GTGGCCAAGC AGGTGCTGCG CGACTACAAG CCCACCGACG ACCTGTGGCC CACCGAGCAC CTGCCCAAGC GCCTCGCCGC GGCGCGTGAG AAGTACGCCG AGTACCTGGA GCTCGAAGTG GGGAACCTGT GA
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Protein sequence | MSWDFETEPE YQAQLDWADK FVREEVEPLD MAWPDLQFVP RGETLQRVID PLRQQVKDHG LWATHLGPEL GGQGHGQLKL SLLNEILGRS SWAPIVFGCQ APDTGNAEII AHYGTEAQKK QYLQPLLDGE CFSSYSMTEP QAGSDPTQFT CSAVKDGDGW VINGWKFFSS NASTARFVIV MVVTNPDVSR YRGMSMFLIP TDTPGINIVR NVGLPGEPLG EGHHALIHYE DVRVSDDALL GGEGQAFAIA QTRLGGGRIH HAMRTIGLAK KALDMMCERA LSRSTQGSLL ADKQFVQGFI ADSYAQLAQF RLFVLYTAWS IDKHKDYRKV RKDIAAVKVV MPAVLHDIAS RALQVHGALG ASNEMPFHQM VMGSFVMGLA DGPTEVHKVT VAKQVLRDYK PTDDLWPTEH LPKRLAAARE KYAEYLELEV GNL
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