Gene Franean1_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0011 
Symbol 
ID5668438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp17052 
End bp17921 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content75% 
IMG OID641238940 
Productmethyltransferase type 11 
Protein accessionYP_001504386 
Protein GI158311878 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCG TCGACTTCAC CCGGTTCCCC GTCCCGCGCG ACGCCCGGGT TCTCGACCTG 
GGCTGCGGCG CGGGGCGGCA CTCCTTCGAG GCGTTCCGCC GGGGCGCACA CGTGATCGCC
CTCGACTACT CGACCGACGA GGTCACCGGC GTCGGCGCGA TGCTCGCCGC CATGTCCGCC
GAGGGCCAGG TTCCCGCCGG CGCCCGCGCG GCGCCCGTGC GCGGCGACGC GCTGGCGCTG
CCGTTCGCGG ACGACACCTT CGACCGGGTC ATCGCGGCCG AGGTCCTGGA GCACCTGCCC
GAGGACACCG GCGCGATGGC CGAGCTGGCC CGCGTGCTGC GCCCCGGCGG GTTCGCGGCG
GTCACCGTGC CCGCCCGCCT CCCGGAACGG GTCTGCTGGG CGCTGTCGGA CGACTACCAC
AACGTCGAGG GCGGCCACAT CCGCATCTAC CGGCGCGACC AGCTGATCGA GAAGCTGCGT
GCCAACGGCC TCGAGCTGGT CGGCCATCAC CGCGCGCACT CCCTGCACGC CCCCTACTGG
TGGCTGCGCT GCCTGGTCGG CGTGCACGAC GACGACCACC CCGCCACGAA GCTGTACCAC
CGCCTCCTGG TCTGGGACAT GATGCGCCGC CCGGCGCTCA CCCGGATGGC CGAACGCCTG
CTGGACCCGG TGCTCGGCAA GAGCATCGTG CTCTACCTGC GCAAGCCGCG CCCCAGGCCG
GAGCCGCCGG CGCGCTCACC GGCGCAGGCA GGGGTGACGA CGGACGCGCA GGCGGTTGCG
GCAGTGGACG CGGCGGCGCA GGCGGGTACG GACGCGCTGG CCGCACGGGC CGGCGGCAGG
ACACCGGAGG TCGAGCGTGC GGCCAGGTGA
 
Protein sequence
MLTVDFTRFP VPRDARVLDL GCGAGRHSFE AFRRGAHVIA LDYSTDEVTG VGAMLAAMSA 
EGQVPAGARA APVRGDALAL PFADDTFDRV IAAEVLEHLP EDTGAMAELA RVLRPGGFAA
VTVPARLPER VCWALSDDYH NVEGGHIRIY RRDQLIEKLR ANGLELVGHH RAHSLHAPYW
WLRCLVGVHD DDHPATKLYH RLLVWDMMRR PALTRMAERL LDPVLGKSIV LYLRKPRPRP
EPPARSPAQA GVTTDAQAVA AVDAAAQAGT DALAARAGGR TPEVERAAR