Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4454 |
Symbol | |
ID | 3907430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5325675 |
End bp | 5327111 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637881786 |
Product | S-adenosyl-L-homocysteine hydrolase |
Protein accession | YP_483529 |
Protein GI | 86743129 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.787736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTCG AGTTCAAGGT CGCGGATCTC GCACTGGCCG AGTTCGGCCG CAAGGAGATC CGGCTTGCCG AGCACGAGAT GCCCGGCCTC ATGGCCACCC GGGCGGAATA CGCGGCCAGC CAGCCCCTCA GGGGCGCCCG CATCATGGGC TCCCTGCACA TGACAATTCA GACCGCGGTG CTGATCGAGA CCTTGGTAGC GCTCGGCGCC GACGTCCGTT GGGTCTCCTG CAACATCTTC TCCACCCAGG ACCACGCGGC CGCCGCCGTC GTCGTCGGGC CGAACGGCAG CAAGGACGAC CCGCGGGGCG TGCCGGTCTT CGCCTGGAAG GGCGAGACCC TCGAGGAGTA CTGGTGGTGC ACGGACCAGG CGCTGGCCTG GCCGGACGGC GGCACCCCGA ACATGATCCT CGACGACGGC GGCGACGCGA CCCTGCTCGT CCACAAGGGC GCCCAGTTCG AGGCGGCCGG CGCGGTCCCC GCGACGGACG CCGCGGACGG CGAGGAGTAC GCGATCGTCC TGGAGACCCT GCGCCGCACC ATCGCGCAGA AGCCGGGTCG GTGGGCCGAG ACCGCGAAGA ACATCAAGGG CGTCACCGAG GAGACCACGA CCGGCGTGCA CCGTCTCTAT GAGATGGCGA AGGCCGGCAC GCTGGCATTC CCGGCGATCA ACGTCAACGA CTCGGTGACG AAGTCGAAGT TCGACAACAA GTACGGCTGC CGCCACTCCG TCATCGACGG TCTCAACCGC GCCACCGACG TGCTCATCGG CGGCAAGGTC GCCGTGGTGT GCGGCTACGG TGACGTCGGC AAGGGCTGTG CGGACGCGCT GCGCGGCCAG GGAGCCCGGG TGATCGTCAC CGAGATCGAC CCGATCTGCG CCCTGCAGGC CGCGATGGAC GGTTTCCAGG TCACCACCCT GGAGGACGTC GTCGCGACGG CGGACATCTT CGTCACCACG ACCGGCAACT TCAACATCAT CCATGCCGAG CACATGGCTG CGATGAAGCA CCAGGCGATC GTGTCGAACA TCGGGCACTT CGACAACGAG ATCGACATGG CCGGCCTGGC CAGGACCCCC GGCATCGAGA AGATCAACAT CAAGCCGCAG GTCGACGAGT GGGTGTTCCC GGACGGCCAC TCGATCATCG TGTTGGCCGA GGGCCGGCTG ATGAACCTCG GTTGCGCCAC CGGACATCCG AGCTTCGTGA TGTCGAACAG CTTCACCAAC CAGGTGATCG CGCAGATCGA GCTGTTCACG AAGACCGAAA ACTACCCCGT CGGGGTATAC GTGCTGCCCA AGCACCTCGA CGAGAAGGTC GCCCGGCTGC ACCTCGACGC GCTGGGCGTG AGGCTCACCC AGCTGACCAA GCAGCAGGCG GACTACATCG GCGTGCCCGT CGAGGGTCCG TACAAGGCCG ACCACTACCG CTACTGA
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Protein sequence | MSFEFKVADL ALAEFGRKEI RLAEHEMPGL MATRAEYAAS QPLRGARIMG SLHMTIQTAV LIETLVALGA DVRWVSCNIF STQDHAAAAV VVGPNGSKDD PRGVPVFAWK GETLEEYWWC TDQALAWPDG GTPNMILDDG GDATLLVHKG AQFEAAGAVP ATDAADGEEY AIVLETLRRT IAQKPGRWAE TAKNIKGVTE ETTTGVHRLY EMAKAGTLAF PAINVNDSVT KSKFDNKYGC RHSVIDGLNR ATDVLIGGKV AVVCGYGDVG KGCADALRGQ GARVIVTEID PICALQAAMD GFQVTTLEDV VATADIFVTT TGNFNIIHAE HMAAMKHQAI VSNIGHFDNE IDMAGLARTP GIEKINIKPQ VDEWVFPDGH SIIVLAEGRL MNLGCATGHP SFVMSNSFTN QVIAQIELFT KTENYPVGVY VLPKHLDEKV ARLHLDALGV RLTQLTKQQA DYIGVPVEGP YKADHYRY
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