Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4388 |
Symbol | |
ID | 3907362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5244793 |
End bp | 5246571 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637881719 |
Product | hypothetical protein |
Protein accession | YP_483463 |
Protein GI | 86743063 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0167388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCCGCG GGCGGCGTCA GGCCGCGCCC GTCCCGTCCG GACCGGGCAG CGGCAGGCCC CGACCGGCCG GCATCCTGGC CCCGACCAGG GTGACCCTGC TGGTCCTCGC CGGTGGCGGC GCCGCGGTCG TGGCCATGAT GAGCGAGGGT CGGCTCGGTT CGCGCGATCC GCACACGACC GACCCTTCCT CCTGGTGGGG CATTCTCCCA TCGGCGGCCT CGTCGGATAC CGCAAGGGGC GTCCTGGCCG GCCTGGCGGC CCTGGGCATC ATCACTCTGT GTCTGTGCTG GGGCGGACTT GTGCGCGCGA CGATCGCCGG CCGCACCTCC CCGCGGGCCG CCCTCGCGGC GTGGATCGTC TGGAGCCTCC CGTTCGCGGT GGGCCCACCA CTGTTCAGCC GGGACATCTA CGCCTACGCC GCTCAGGGTG AGCTGGCGAG GCTCGGCCTG GATCCGGCGA CACACGGCGT CTCCGCCCTG CTGACCGCCG AGGGCTCGGG CTCGGCGTTC GTCCGGGCCG TTGACCCCCG GTGGTGGAAC ACCCATGCGC CCTATGGCGG TGCCGCGGTC GCCGTGGAGA AGAGCGCCGC GGCCCTCGGC GGCGGGCCGG CCGGGACGGT CGCGCTGCTC AAGATAGTCG CGATCCTCGC AACGATCGCG ATGGTCGTCC TGACGCTACG GCTCGCCGGA CCGGAGCCGG GCCGACGGGC CCTGGTCATG GTGCTCGTCG CGGCCAATCC GGTCGTCGTC GTGCACCTGA TCGGCGGAGC CCACCTCGAC GCAACGGCCG CGGCGCTGCT CGTGGCGGCG CTGGTGGTGG ACCGCCGACG GCTCGCCTCG GCACCGGCGC CCGGCCCGGA GGGAAGGAGC ACGCCGACGG CTCGGCAGGC CGCGCTCGGC GCCGCGGCGA CGGCGCTGGT CAGCGTGGCC GGAAGCGTCA AGGCGACCGC CCTCCTCGGC GTCGCCTGGC TGGTGCTGGC GCATCTGCGG GCCGCCCGGT CGGCGCGGCG TCCGATCCGC GCCGGCGCCG TGCTGCTCGC GGCCGATGCC GCCGCGGTCG CGCTCGCCGC GGGGCTGAGC ATGGTGGCTG GCGGCTTCGG CCCGACCTGG ATCCACGCGT TGTCCACGTC GGGCACCCTG ACCACGGGGG CCGCACCGGC CTCGATTCTC GCCGCGGCGG TCGACGGGGT CGACGGCATG CTTGGTCCGG TCGGCCGCCA TCCGTCCGGC GCCGAAACGC AGCGGGCGAC TCGGGCCCTG TGCCTGGCCG GCGCGGCGCT GGTGGTGGCC TGGCTCGCCC TGCGCGCCTG GCGGGACCGG GACGGGTACA CCGGCCGTCG GCACGACCTG ATCGTGCTCG GCTACGGCGG GCTGGCGGTG GCGCTCGGCA GCCCGGTGCT CTACCCCTGG TACCTCGCGC TGTGCCTGCC GGCACTCGCG GTCGTCGTGG CCCTCGCCCG GTCAACCCCG CCGACGCCCC ACCCTGGAAC GGCCCGTCCC AGGACGCCGG GGATGCAACC ACGCCGCATG AGGCGTCTCG GGGCGGCCGT CGAGCGGATC GTCGGGGGGG TCGGGGGGTG GACCATCGCC CTGGTGGTCG TCACGTCGGC CTGGCTGTGC CTGACGACCC TCGCGCCGCT CGCCGCGACC TGGCGGCTGC TCGGGCGCGT CGAGACGTCC CTGGCCGTCA TCGGCTGCGC CGGCCTTGCG GCCGCGGGAA CGGTCATCAC GCTGGTCGCG ATCCGGCGGC GGCACGCCAC GCCCACCCGC AGACGGTGA
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Protein sequence | MPRGRRQAAP VPSGPGSGRP RPAGILAPTR VTLLVLAGGG AAVVAMMSEG RLGSRDPHTT DPSSWWGILP SAASSDTARG VLAGLAALGI ITLCLCWGGL VRATIAGRTS PRAALAAWIV WSLPFAVGPP LFSRDIYAYA AQGELARLGL DPATHGVSAL LTAEGSGSAF VRAVDPRWWN THAPYGGAAV AVEKSAAALG GGPAGTVALL KIVAILATIA MVVLTLRLAG PEPGRRALVM VLVAANPVVV VHLIGGAHLD ATAAALLVAA LVVDRRRLAS APAPGPEGRS TPTARQAALG AAATALVSVA GSVKATALLG VAWLVLAHLR AARSARRPIR AGAVLLAADA AAVALAAGLS MVAGGFGPTW IHALSTSGTL TTGAAPASIL AAAVDGVDGM LGPVGRHPSG AETQRATRAL CLAGAALVVA WLALRAWRDR DGYTGRRHDL IVLGYGGLAV ALGSPVLYPW YLALCLPALA VVVALARSTP PTPHPGTARP RTPGMQPRRM RRLGAAVERI VGGVGGWTIA LVVVTSAWLC LTTLAPLAAT WRLLGRVETS LAVIGCAGLA AAGTVITLVA IRRRHATPTR RR
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