Gene Francci3_4368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4368 
Symbol 
ID3907342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5216835 
End bp5218118 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content68% 
IMG OID637881699 
Productadenylosuccinate synthetase 
Protein accessionYP_483443 
Protein GI86743043 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.335736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCTC TTGTCCTCAT CGGTGCCCAG TGGGGCGACG AGGGAAAAGG AAAGGCGACC 
GACCTCCTGG GCGGCGCCGT CGATTACGTC GTCCGGTACC AGGGTGGCAA CAACGCCGGC
CACACCGTGG TCATCGGGGC GGAGAGTTAC GCGCTCCACC TGATTCCCAG TGGCATGCTG
CGGGCCGACT GCGTTCCCGT GATCGGCAAC GGGGTCGTCA TCGACCCGGG CGTGCTGCTG
GCCGAGATGG ACGGGCTCAC CGCCCGCGGC ATCGACGTCT CCCGGCTCCT GATCAGCGCG
AACGCCCATC TGATCATGCC CCATCACCGG GCGCTGGACC GGGTCATCGA GCGTTACCTG
GGCAAGGCGC GGATCGGTAC CACCGGTCGC GGCATCGGTC CCACCTACGG CGACAAGGTT
GCCCGTACGG GCATCAGAGT GCAGGATCTC CTCGACCCGG GCATCTTCCA CAAGAAGCTC
GAACTGGTGC TACGGGAGAA GAACCAGGTC CTGGCCAAGG TCTACAACCG GCGCCGGATC
GAGCTCGACG AGGTGGTCGA GGAGTACGCC GACTACGCGA AACGCCTGCA ACCCCACATC
GCCGACACCG GTCTGATCCT CGACCGGGCG CTGCGCGCGG GCAAGGTCGT GCTGCTCGAA
GGCTCCCAGG GCACCCTCCT CGACGTCGAC CACGGCACCT ACCCGTTCGT CACGTCATCG
AACCCGACCG CCGGCTACGC GGCCACCGGC GCCGGCATCG GCCCGACGAG GATCAGTCGG
GTGATCGGCA TCATCAAGGC CTACACGACC CGGGTCGGCG CCGGCCCCTT CCCCACCGAA
CTGGACGACA AGGTCGGAGA GGAGCTGCGC CGCATCGGCG GGGAGTTCGG CGTGACGACC
GGCCGGGCGC GGCGCACCGG CTGGTTCGAC GCCGTAATCG CCCGCTACGC GGTGCGGGTC
AACGGCCTGA CCGACCTTTT CCTCACCAAA CTGGACGTCC TGTCGGGCTT CGACCGGGTG
CCCATCTGCG TCGGCTACGA CCTCGGCGGC GAACGGGTTG ACGAGATGCC CATGACCCAG
ACCGAGTTCC ACCACGCCAA GCCGATCTAC ACCGACCTGC CCGGCTGGCA CGAGGACATC
TCCGACGTCC GGTCGTTCGC CGACCTGCCC GGCGCCGCGA AGGACTACAT CAGGGCGTTG
GAGGAGTTCT CCGGCGCCCC GGTGTCGGCG GTCGGCGTCG GTCCCGGGCG GGACCAGACG
CTCGTCATCA ATGACCTGGT CTGA
 
Protein sequence
MPALVLIGAQ WGDEGKGKAT DLLGGAVDYV VRYQGGNNAG HTVVIGAESY ALHLIPSGML 
RADCVPVIGN GVVIDPGVLL AEMDGLTARG IDVSRLLISA NAHLIMPHHR ALDRVIERYL
GKARIGTTGR GIGPTYGDKV ARTGIRVQDL LDPGIFHKKL ELVLREKNQV LAKVYNRRRI
ELDEVVEEYA DYAKRLQPHI ADTGLILDRA LRAGKVVLLE GSQGTLLDVD HGTYPFVTSS
NPTAGYAATG AGIGPTRISR VIGIIKAYTT RVGAGPFPTE LDDKVGEELR RIGGEFGVTT
GRARRTGWFD AVIARYAVRV NGLTDLFLTK LDVLSGFDRV PICVGYDLGG ERVDEMPMTQ
TEFHHAKPIY TDLPGWHEDI SDVRSFADLP GAAKDYIRAL EEFSGAPVSA VGVGPGRDQT
LVINDLV