Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4356 |
Symbol | |
ID | 3907328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5201861 |
End bp | 5204470 |
Gene Length | 2610 bp |
Protein Length | 869 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637881687 |
Product | ATPase AAA-2 |
Protein accession | YP_483431 |
Protein GI | 86743031 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.508325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTG AACGCCTCAC CGCCCGGTCG CAGGAGGCAC TCTCCGCAGC GATCAGTCGA GCCACCGCCG ACGGGTCACC CCTCGTCGAC CCCCTCCACC TGCTCAACGC CCTGCTCGAA GCGTCCGACG GGGTCGGCGC GGCACTGCTG GCGTCCGCGG GCACCTCGGT CGACACGGTG CGCTCCCGAG CCGAGGCCGC GGTGACGCGG CTGCCCCGCG CGACGGGCCT GAGCGTGTCC CCGCCGCAGC TGTCCCGCCA GCTCATCGCG GTGCTGAACA ACGCCGAGCG GCAGGCCGGT CAGCTGGGTG ACGAATACAC TTCGGTCGAG CATCTGGTCG TGGCACTCGC CGAGGAGGGG GGCGAGGCCG GGCGGATCCT CACCTCCGCC GGCGCCACGC CCGACGCGCT GCGCGGCGCC TTCGAGAAGG TGCGCGGCGG CGCCCGGCGG GTGACCAGCC GGGACCCGGA GGGCTCCTAC CGCGCGTTGG AGAAGTACTC CATCGACCTC ACCGAGCGTG CGCAGCAGGG CAAGCTGGAC CCGGTGATCG GCCGCGACGC CGAGATCCGC CGCGTCATCC AGGTGCTGTC GCGGCGGACG AAGAACAACC CGGTCCTCAT CGGCGAGCCC GGGGTCGGCA AGACGGCCAT CGTCGAAGGG CTCGCGCTGC GGGTCGTCGC GGGTGACGTG CCCGAGTCGC TGCGCGGCCG GCGCATCGTC TCGCTCGACC TCGGTTCGAT GGTTGCCGGC TCCAAGCTGC GCGGCGAGTT CGAGGAGCGG CTGACCTCTG TCCTCAACGA GATCCGCGAG GCCGAGGGTC AGATCATCAC CTTCATCGAC GAGCTGCACA CCGTCGTCGG CGCCGGTGCG GCGGAAGGAG CGATGGACGC CGGCAACATG CTCAAGCCGA TGCTCGCCCG CGGCGAGCTG CGCATGATCG GCGCCACCAC CCTGGAGGAG TACCGCACCC GGATCGAGAA GGACCCGGCG CTGGAGCGTC GCTTCCAGCC GGTCCTCGTC GGCGAGCCGA CGGTCGAGGA CACCATCGGC ATCCTGCGCG GGCTCAAGGA ACGCTACGAG GTGCACCACG GCGTGCGCAT CACCGACACC GCGCTGGTCG CCGCGGCCAC CCTGTCCGAC CGCTACGTCA CCGCGCGCTT CCTGCCGGAC AAGGCGATCG ACCTGGTCGA CGAGGCCGCG TCCCGGCTCC GCATGGAGAT CGACAGCCGG CCGGTGGCGA TCGACGAACT CGAACGCGCC GTGCGCCGCC TGGAGATCGA GGACATGGCG CTGTCCAAGG AGAACGACGA GGCCTCCCGC GAGCGGCGGG GGCGCCTGCA GCGCGAGCTC GCCGACCGGC GTGAGGAGCT GTCGAGCCTG ACGGCCCGCT GGCACCGGGA GAAGGATTCG ATCTCCGAGG TTCAGAAGAT CAAGGAGGAG CTGGAGAACG CGCGGCGCGC CGTGGAGCTC GCCGAGCGCG ACCTCGACCT CGCCAAGGCC GGGGAGCTGC GGTACGGCAC CATCCCGACG TTGGAGAAGC GGCTGTCGGC GGCAACCGAC GCGCTGGCCG GCGCGGACTC CCCCGGTGGG GCGATGCTCA ACGAGGAGGT CGGCCCGGAC GACGTCGCCG AGGTCGTCGC CGCCTGGACC GGGATCCCGG CCGGTCGCCT CCTCGAAGGC GAGACGGCGA AGCTGCTGCG TATGGAGTCC GCGCTGCACG CGCGGGTCAT CGGCCAGGAC GACGCGGTGC GGGCCGTCTC CGACGCGGTC CGCCGGGCCA GGGCCGGGAT CGCCGACCCG GACCGGCCGA CCGGCTCCTT CCTCTTCCTC GGGCCCACCG GGGTCGGGAA GACCGAGCTC GCGAAGGCGC TCGCCGATTT CCTCTTCGAC GACGAGCGGG CGATCGTGCG CATCGACATG AGCGAGTATG CCGAGAAGCA CTCGGTGGCC CGTCTGATCG GCGCCCCACC CGGGTACGTC GGGTTCGAGT CCGGCGGTCA GCTCACCGAG GCGATCCGCC GCCGGCCATA CAGTGTCATC CTGTTGGACG AGGTCGAGAA GGCCCATCCG GACGTCTTTG ACGTCCTGCT GCAGGTTCTC GACGACGGGC GGCTCACCGA CGGCCAGGGC CGCACGGTGG ACTTCCGCAA CACGATCCTC ATCCTGACCT CGAACCTCGG GTCGCAGTTC ATCGCGGACC CCACGCTCAG CCCGCAGGTG CGCCGCGAGT CGGTGATGGT CGCCGTGCGC GACGCCTTCA AGCCGGAGTT CCTCAACCGC CTCGACGACG TCCTCGTCTT CGACCAGCTG GGCCGGGACG AGCTGACCCG CATCGTCGAT CTCCAGCTCG ATCGGCTGCG GGCCCGGCTG CTCGACCGGA GGATCACCCT CAACGTCACC GACGCCGCCA AGGGATGGCT CTCCGACGTC GGCTACGACC CGGTGTTCGG GGCCCGTCCG CTGCGGCGGC TGGTCCAGAC GGCGATCGGC GACCAGCTCG CCAAGGAACT GCTCGGCGGG CAGATCCGGG ACGGCGACGA GGTGCTCGTC AACACCGCGC CGGACCGCTC GGGTCTGACG GTCAAGGCCG CCACCGTCAA GTCCCTCTGA
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Protein sequence | MNAERLTARS QEALSAAISR ATADGSPLVD PLHLLNALLE ASDGVGAALL ASAGTSVDTV RSRAEAAVTR LPRATGLSVS PPQLSRQLIA VLNNAERQAG QLGDEYTSVE HLVVALAEEG GEAGRILTSA GATPDALRGA FEKVRGGARR VTSRDPEGSY RALEKYSIDL TERAQQGKLD PVIGRDAEIR RVIQVLSRRT KNNPVLIGEP GVGKTAIVEG LALRVVAGDV PESLRGRRIV SLDLGSMVAG SKLRGEFEER LTSVLNEIRE AEGQIITFID ELHTVVGAGA AEGAMDAGNM LKPMLARGEL RMIGATTLEE YRTRIEKDPA LERRFQPVLV GEPTVEDTIG ILRGLKERYE VHHGVRITDT ALVAAATLSD RYVTARFLPD KAIDLVDEAA SRLRMEIDSR PVAIDELERA VRRLEIEDMA LSKENDEASR ERRGRLQREL ADRREELSSL TARWHREKDS ISEVQKIKEE LENARRAVEL AERDLDLAKA GELRYGTIPT LEKRLSAATD ALAGADSPGG AMLNEEVGPD DVAEVVAAWT GIPAGRLLEG ETAKLLRMES ALHARVIGQD DAVRAVSDAV RRARAGIADP DRPTGSFLFL GPTGVGKTEL AKALADFLFD DERAIVRIDM SEYAEKHSVA RLIGAPPGYV GFESGGQLTE AIRRRPYSVI LLDEVEKAHP DVFDVLLQVL DDGRLTDGQG RTVDFRNTIL ILTSNLGSQF IADPTLSPQV RRESVMVAVR DAFKPEFLNR LDDVLVFDQL GRDELTRIVD LQLDRLRARL LDRRITLNVT DAAKGWLSDV GYDPVFGARP LRRLVQTAIG DQLAKELLGG QIRDGDEVLV NTAPDRSGLT VKAATVKSL
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