Gene Francci3_4356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4356 
Symbol 
ID3907328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5201861 
End bp5204470 
Gene Length2610 bp 
Protein Length869 aa 
Translation table11 
GC content71% 
IMG OID637881687 
ProductATPase AAA-2 
Protein accessionYP_483431 
Protein GI86743031 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.508325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG AACGCCTCAC CGCCCGGTCG CAGGAGGCAC TCTCCGCAGC GATCAGTCGA 
GCCACCGCCG ACGGGTCACC CCTCGTCGAC CCCCTCCACC TGCTCAACGC CCTGCTCGAA
GCGTCCGACG GGGTCGGCGC GGCACTGCTG GCGTCCGCGG GCACCTCGGT CGACACGGTG
CGCTCCCGAG CCGAGGCCGC GGTGACGCGG CTGCCCCGCG CGACGGGCCT GAGCGTGTCC
CCGCCGCAGC TGTCCCGCCA GCTCATCGCG GTGCTGAACA ACGCCGAGCG GCAGGCCGGT
CAGCTGGGTG ACGAATACAC TTCGGTCGAG CATCTGGTCG TGGCACTCGC CGAGGAGGGG
GGCGAGGCCG GGCGGATCCT CACCTCCGCC GGCGCCACGC CCGACGCGCT GCGCGGCGCC
TTCGAGAAGG TGCGCGGCGG CGCCCGGCGG GTGACCAGCC GGGACCCGGA GGGCTCCTAC
CGCGCGTTGG AGAAGTACTC CATCGACCTC ACCGAGCGTG CGCAGCAGGG CAAGCTGGAC
CCGGTGATCG GCCGCGACGC CGAGATCCGC CGCGTCATCC AGGTGCTGTC GCGGCGGACG
AAGAACAACC CGGTCCTCAT CGGCGAGCCC GGGGTCGGCA AGACGGCCAT CGTCGAAGGG
CTCGCGCTGC GGGTCGTCGC GGGTGACGTG CCCGAGTCGC TGCGCGGCCG GCGCATCGTC
TCGCTCGACC TCGGTTCGAT GGTTGCCGGC TCCAAGCTGC GCGGCGAGTT CGAGGAGCGG
CTGACCTCTG TCCTCAACGA GATCCGCGAG GCCGAGGGTC AGATCATCAC CTTCATCGAC
GAGCTGCACA CCGTCGTCGG CGCCGGTGCG GCGGAAGGAG CGATGGACGC CGGCAACATG
CTCAAGCCGA TGCTCGCCCG CGGCGAGCTG CGCATGATCG GCGCCACCAC CCTGGAGGAG
TACCGCACCC GGATCGAGAA GGACCCGGCG CTGGAGCGTC GCTTCCAGCC GGTCCTCGTC
GGCGAGCCGA CGGTCGAGGA CACCATCGGC ATCCTGCGCG GGCTCAAGGA ACGCTACGAG
GTGCACCACG GCGTGCGCAT CACCGACACC GCGCTGGTCG CCGCGGCCAC CCTGTCCGAC
CGCTACGTCA CCGCGCGCTT CCTGCCGGAC AAGGCGATCG ACCTGGTCGA CGAGGCCGCG
TCCCGGCTCC GCATGGAGAT CGACAGCCGG CCGGTGGCGA TCGACGAACT CGAACGCGCC
GTGCGCCGCC TGGAGATCGA GGACATGGCG CTGTCCAAGG AGAACGACGA GGCCTCCCGC
GAGCGGCGGG GGCGCCTGCA GCGCGAGCTC GCCGACCGGC GTGAGGAGCT GTCGAGCCTG
ACGGCCCGCT GGCACCGGGA GAAGGATTCG ATCTCCGAGG TTCAGAAGAT CAAGGAGGAG
CTGGAGAACG CGCGGCGCGC CGTGGAGCTC GCCGAGCGCG ACCTCGACCT CGCCAAGGCC
GGGGAGCTGC GGTACGGCAC CATCCCGACG TTGGAGAAGC GGCTGTCGGC GGCAACCGAC
GCGCTGGCCG GCGCGGACTC CCCCGGTGGG GCGATGCTCA ACGAGGAGGT CGGCCCGGAC
GACGTCGCCG AGGTCGTCGC CGCCTGGACC GGGATCCCGG CCGGTCGCCT CCTCGAAGGC
GAGACGGCGA AGCTGCTGCG TATGGAGTCC GCGCTGCACG CGCGGGTCAT CGGCCAGGAC
GACGCGGTGC GGGCCGTCTC CGACGCGGTC CGCCGGGCCA GGGCCGGGAT CGCCGACCCG
GACCGGCCGA CCGGCTCCTT CCTCTTCCTC GGGCCCACCG GGGTCGGGAA GACCGAGCTC
GCGAAGGCGC TCGCCGATTT CCTCTTCGAC GACGAGCGGG CGATCGTGCG CATCGACATG
AGCGAGTATG CCGAGAAGCA CTCGGTGGCC CGTCTGATCG GCGCCCCACC CGGGTACGTC
GGGTTCGAGT CCGGCGGTCA GCTCACCGAG GCGATCCGCC GCCGGCCATA CAGTGTCATC
CTGTTGGACG AGGTCGAGAA GGCCCATCCG GACGTCTTTG ACGTCCTGCT GCAGGTTCTC
GACGACGGGC GGCTCACCGA CGGCCAGGGC CGCACGGTGG ACTTCCGCAA CACGATCCTC
ATCCTGACCT CGAACCTCGG GTCGCAGTTC ATCGCGGACC CCACGCTCAG CCCGCAGGTG
CGCCGCGAGT CGGTGATGGT CGCCGTGCGC GACGCCTTCA AGCCGGAGTT CCTCAACCGC
CTCGACGACG TCCTCGTCTT CGACCAGCTG GGCCGGGACG AGCTGACCCG CATCGTCGAT
CTCCAGCTCG ATCGGCTGCG GGCCCGGCTG CTCGACCGGA GGATCACCCT CAACGTCACC
GACGCCGCCA AGGGATGGCT CTCCGACGTC GGCTACGACC CGGTGTTCGG GGCCCGTCCG
CTGCGGCGGC TGGTCCAGAC GGCGATCGGC GACCAGCTCG CCAAGGAACT GCTCGGCGGG
CAGATCCGGG ACGGCGACGA GGTGCTCGTC AACACCGCGC CGGACCGCTC GGGTCTGACG
GTCAAGGCCG CCACCGTCAA GTCCCTCTGA
 
Protein sequence
MNAERLTARS QEALSAAISR ATADGSPLVD PLHLLNALLE ASDGVGAALL ASAGTSVDTV 
RSRAEAAVTR LPRATGLSVS PPQLSRQLIA VLNNAERQAG QLGDEYTSVE HLVVALAEEG
GEAGRILTSA GATPDALRGA FEKVRGGARR VTSRDPEGSY RALEKYSIDL TERAQQGKLD
PVIGRDAEIR RVIQVLSRRT KNNPVLIGEP GVGKTAIVEG LALRVVAGDV PESLRGRRIV
SLDLGSMVAG SKLRGEFEER LTSVLNEIRE AEGQIITFID ELHTVVGAGA AEGAMDAGNM
LKPMLARGEL RMIGATTLEE YRTRIEKDPA LERRFQPVLV GEPTVEDTIG ILRGLKERYE
VHHGVRITDT ALVAAATLSD RYVTARFLPD KAIDLVDEAA SRLRMEIDSR PVAIDELERA
VRRLEIEDMA LSKENDEASR ERRGRLQREL ADRREELSSL TARWHREKDS ISEVQKIKEE
LENARRAVEL AERDLDLAKA GELRYGTIPT LEKRLSAATD ALAGADSPGG AMLNEEVGPD
DVAEVVAAWT GIPAGRLLEG ETAKLLRMES ALHARVIGQD DAVRAVSDAV RRARAGIADP
DRPTGSFLFL GPTGVGKTEL AKALADFLFD DERAIVRIDM SEYAEKHSVA RLIGAPPGYV
GFESGGQLTE AIRRRPYSVI LLDEVEKAHP DVFDVLLQVL DDGRLTDGQG RTVDFRNTIL
ILTSNLGSQF IADPTLSPQV RRESVMVAVR DAFKPEFLNR LDDVLVFDQL GRDELTRIVD
LQLDRLRARL LDRRITLNVT DAAKGWLSDV GYDPVFGARP LRRLVQTAIG DQLAKELLGG
QIRDGDEVLV NTAPDRSGLT VKAATVKSL