Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4352 |
Symbol | dnaK |
ID | 3907324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5197168 |
End bp | 5199018 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637881683 |
Product | molecular chaperone DnaK |
Protein accession | YP_483427 |
Protein GI | 86743027 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.971406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA GGCACACAGA CATGGCACGA GCGGTCGGTA TCGACCTCGG CACCACGAAC TCCGTCGTGA GCGTGCTCGA GGGCGGCGAA CCCACGGTGA TCGCCAACGC CGAGGGCTCC CGGACGACCC CGTCGGTCGT GGCTTTCGCG AAGAACGGCG AGGTCCTGGT CGGCGAGGTC GCCAAGCGTC AGGCGGTGAC GAACGTCGAG CGCACCATCC GGTCGGTCAA ACGCCACATG GGCACCGACT GGAAGATGAA GGTCGACGCG AAGGATCTCA CGCCCCAGGA GATCAGCGCG TTCATCCTGC AGAAGCTGAA GCGGGACGCC GAGTCCTACC TCGGTGAGAC GGTTACGGAC GCGGTCATCA CCGTCCCGGC GTACTTCGAC GACGCCCAGC GTCAGGCCAC CACCGAGGCG GGCACGATCG CCGGGCTCAA CGTCCTGCGG ATTGTCAACG AGCCGACCGC CGCGGCCCTC GCCTACGGGT TGGACAAGGG CGAGAAGGAG CAGACCATCC TGGTCTTCGA CCTCGGTGGC GGCACCTTCG ACGTCTCCCT GCTGGAGATC GGCGACGGTG TCGTCGAGGT GAAGTCCACC TCCGGTGACA CCCACCTCGG TGGTGACGAC TGGGATCAGC GCATCACCGA CCACCTGATC AAGACCTTCA ACGGCCAGCA CGGGGTCGAC CTCGGCAAGG ACAAGATGGC CCTGCAGCGG CTGCGGGAGG CCGCCGAGAA GGCGAAGATC GAGCTTTCGC AGTCCACCCA GACCGCGATC AACCTGCCCT ACATCACCGC GTCGGCCGAG GGTCCCCTGC ACCTCGACGT CTCGCTGTCG CGCGCCGAGT TCCAGCGGAT GACCTCCGAC CTCATCGACC GCTGCAGGCA CCCCTTCCAG CAGGCGGTGA AGGACGCGGG GATCAAGGTC AGCGACATTG ACCACGTCGT CCTCGTCGGT GGTTCCACCC GGATGCCCGC CGTCGTCGAG CTGGTCCGCG AGCTGACCGG GGGCAAGGAG CCGAACAAGG GCGTCAACCC GGACGAGGTC GTCGCCGTCG GCGCCTCGCT GCAGGCCGGC GTGCTCAAGG GCGAAGTCAA GGACGTCCTG CTCCTCGACG TCACCCCGCT CTCGCTCGGC ATCGAGACGA AGGGGGGGAT CATGACCAAG CTCATCGAGC GCAACACCAC GATCCCCACC AAGCGCTCGG AGATCTTCAC CACCGCCGAG GACAGCCAGC CCTCCGTGCA GATCCAGGTC TTCCAGGGCG AGCGCGAGAT GGCCGCCTAC AACAAGAAGC TCGGCATGTT CGAGCTGACC GGCCTGCCGC CCGCCCCGCG GGGCATGCCC CAGATCGAGG TCACCTTCGA CATCGACGCG AACGGCATCG TGCACGTGTC CGCGAAGGAC CTGGGCACCG GCAAGGAGCA GTCGATGACC ATCACCGGCG GCTCGGCGCT GCCGAAGGAC GACATCGACC GCATGGTCCG CGACGCCGAG CAGTACGCCG AGGAGGACCG CAGGCGCCGG GAGGAGGCCG AGACCCGCAA CAAGGCCGAG ACGCTCGTCT ACTCGACCGA GCGGTTCCTC GCCGAGAACG GCGAAAAGAT CGACGCCGCG GTGAAGAGCG ACGTGGAGGA GAAGCTCGGC ACGCTGCGGG GCGCCGTCGC CGGCACCGAC ACGGCGGCGA TCCGCGAGGC GGCCGACGCG CTGGCCGCGG CGAGCCAGGC GATGGGCCAG GCCATGTACG CGCAGGCCGC CCAGGAGGGC GCGGGTGCCT CCGGCGGCGC CGGAGCAGCC GACGACGACG TGGTCGACGC GGAGATCGTG GATGAGGAGG ACAAGAAGTG A
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Protein sequence | MIERHTDMAR AVGIDLGTTN SVVSVLEGGE PTVIANAEGS RTTPSVVAFA KNGEVLVGEV AKRQAVTNVE RTIRSVKRHM GTDWKMKVDA KDLTPQEISA FILQKLKRDA ESYLGETVTD AVITVPAYFD DAQRQATTEA GTIAGLNVLR IVNEPTAAAL AYGLDKGEKE QTILVFDLGG GTFDVSLLEI GDGVVEVKST SGDTHLGGDD WDQRITDHLI KTFNGQHGVD LGKDKMALQR LREAAEKAKI ELSQSTQTAI NLPYITASAE GPLHLDVSLS RAEFQRMTSD LIDRCRHPFQ QAVKDAGIKV SDIDHVVLVG GSTRMPAVVE LVRELTGGKE PNKGVNPDEV VAVGASLQAG VLKGEVKDVL LLDVTPLSLG IETKGGIMTK LIERNTTIPT KRSEIFTTAE DSQPSVQIQV FQGEREMAAY NKKLGMFELT GLPPAPRGMP QIEVTFDIDA NGIVHVSAKD LGTGKEQSMT ITGGSALPKD DIDRMVRDAE QYAEEDRRRR EEAETRNKAE TLVYSTERFL AENGEKIDAA VKSDVEEKLG TLRGAVAGTD TAAIREAADA LAAASQAMGQ AMYAQAAQEG AGASGGAGAA DDDVVDAEIV DEEDKK
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