Gene Francci3_4338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4338 
Symbol 
ID3907308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5179218 
End bp5179841 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content70% 
IMG OID637881667 
Productphage integrase 
Protein accessionYP_483413 
Protein GI86743013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.857538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.897623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGGC GCGACCTACC AGGGGCTCCG ACGCGGTGCA TCCGTCGCCG TCCACCTGGA 
CGACATCGAC TTCACCAACG CAACTCTCAC CCTCCGCTGG CAGTTCGTCC AGATCGGCTA
CGCCACCCAA CTCGCCAAGC CGAAATCCGA CGCCGGGGAC CGTGTCATCT CCCTCGGCCC
CGACACCCTC GCCGTCCTGA AAGCCTGCCG CACCCGCCAA CACGCCAACC GGCTCGCCGC
CGGAACCACC CGGCCGAACA ACGGCCTCGC GTTCACCCAC CCCGACGGCA CTCCCATCCA
CCCCGAACAC CTCACCAACC GCTTCCACAC CCTCATCCAG GAAGCCGACC TACCCCCATC
ACCATCCGCG GCCTCCGCCA CGGCGCCGCC ACCCTCGCCC TCGCCGCCAC CCTCGCCCTC
GCCGCCACCC TCGCCCTCGC CGCCGGCGCC GACCTCAAAG CAGTCCAAGA ACTCCTCGGC
CACTCCACGA TCATGATCAC CGCCGACACC TACACCCACA TCCTCCCCGA CCTCGCCGCC
GAGATCGCCC GCAACACCGC CCGCCTCATC CCCCGCACCC GCAGCCCCCA GGAGTACCCC
CGACACACCA CCACGATCGA CTAA
 
Protein sequence
MKRRDLPGAP TRCIRRRPPG RHRLHQRNSH PPLAVRPDRL RHPTRQAEIR RRGPCHLPRP 
RHPRRPESLP HPPTRQPARR RNHPAEQRPR VHPPRRHSHP PRTPHQPLPH PHPGSRPTPI
TIRGLRHGAA TLALAATLAL AATLALAAGA DLKAVQELLG HSTIMITADT YTHILPDLAA
EIARNTARLI PRTRSPQEYP RHTTTID