| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4302 |
|---|
| Symbol | |
|---|
| ID | 3907270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 5135084 |
|---|
| End bp | 5135425 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637881629 |
|---|
| Product | anti-sigma-factor antagonist domain-containing protein |
|---|
| Protein accession | YP_483377 |
|---|
| Protein GI | 86742977 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACCTGT CCCTCACGAC ACGCCAGGAA GGCAACCACA CGGTCGTGGT GGTGGGCGGC
GAGATCGACG TCTACACCGC GCCGAAGCTT CGCGAGCAGC TCATCGATCT CGTGTCCGGG
GGGTCATACC ACCTCGTCGT CGACATGGAA GGCGTCGAGT TCCTCGATTC GACGGGCCTC
GGGGTCCTCG TCGGCGGGCT CAAGCGGGTG CGTGCGCACG AGGGTTCGCT GCGTCTGGTC
TGCACTCAGG AGCGCATCCT GAAGATTTTC CGGATCACCG GCCTGACCAA GGTCTTCCCC
ATCCACTCCT CCATCGAGGA AGCCCTTGCC GCCAGCGACT GA
|
|---|
| Protein sequence | MDLSLTTRQE GNHTVVVVGG EIDVYTAPKL REQLIDLVSG GSYHLVVDME GVEFLDSTGL
GVLVGGLKRV RAHEGSLRLV CTQERILKIF RITGLTKVFP IHSSIEEALA ASD
|
|---|
| |