Gene Francci3_4295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4295 
Symbol 
ID3907263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5125290 
End bp5126321 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content74% 
IMG OID637881622 
Producthypothetical protein 
Protein accessionYP_483370 
Protein GI86742970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.402555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCTCC GCCCGTCTGG AACAATCCTC GCCGCCGATC CACTCGCCCG TGTTGCCGCT 
CTGCCCGGGG TGCGTGAAGC CGCGGACAGC GCCCGATCCG CGGTGGACAC GCTTCTGCGC
CACCGCGTTC TGCGCCGCCA GAGCGCCGAG GTGACCGCGG AGGCATCGTT GCGGGCCGCC
CGCGCCTGCG CCGCCCTCGA GGGATACGAG ATCAGCCTGG ACGAGTTGCG GGCGCACCTG
GCCCGGTCCG GGCCCGAAGG CGTGCTCCCC GGCCCGGAGG AAACGGACGC GTCGAAGGCC
GGAGCGGTCA CCGACCGCGG TACACGGAAC GACGCCGCCA TGACCGGATC CGGCCATCCG
TTACCTGTCG TCCTCGGCAC GGTTCGGCTC TACGCCGAAC TGGGCATCCT GGTTCCGGCC
TGGGAGCGGG CACCGCGACA GGCCCTGGCC CGCATGCACG TGCTGCTGGG CCGGGGTTTC
GTCCCGGACG ACGAGCTCGG TCGTCCGCGG GCCGATGCCG GCACCCGGGC GATCCTCGAC
CCGTTGCGGT TGGGCCCGCC TCCCCACTCG GTGGAGACCT CGGTTCGGCT GGATGGCCTG
ACCGGACTCC TCGTCGCGCC CACGAGCGCG CCGGCGATCG TGGTGGCCGC CGTGGTGCAC
GGGGAGCTGC TGGCCCTACG ACCGTTCGGC GCCCTCGACG GGGTCATCGC CCGGGCCGCC
GCCCGTCTGG TCCTGATCGG CCGGGGCCTC GATCCCAAGG CACTCACGGC GACCGACGTC
GGACATCTCG AGATGGGACA GAACCCGGCG AGCATCCTGC GGGTGGACCG CGCGGGGGAC
GCCCACGCCG GAGAGGCCTA CGCCGGAGAG GCCTACGCCG GGGACGCCTA CGCCGGGTAC
CGCGAGGCCG CCGCGGCCTA TGTCGGTGGC GGCGCCGACG GCGTGGCCAT CTGGGTACGG
CACTGCGCGA AGGCCCTGGA ACTCGCCGCG CGGGAGTCCC TCGCCGTCTG CGAGGCGCTC
GCCCGAACCT GA
 
Protein sequence
MSLRPSGTIL AADPLARVAA LPGVREAADS ARSAVDTLLR HRVLRRQSAE VTAEASLRAA 
RACAALEGYE ISLDELRAHL ARSGPEGVLP GPEETDASKA GAVTDRGTRN DAAMTGSGHP
LPVVLGTVRL YAELGILVPA WERAPRQALA RMHVLLGRGF VPDDELGRPR ADAGTRAILD
PLRLGPPPHS VETSVRLDGL TGLLVAPTSA PAIVVAAVVH GELLALRPFG ALDGVIARAA
ARLVLIGRGL DPKALTATDV GHLEMGQNPA SILRVDRAGD AHAGEAYAGE AYAGDAYAGY
REAAAAYVGG GADGVAIWVR HCAKALELAA RESLAVCEAL ART