Gene Francci3_4241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4241 
Symbol 
ID3907207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5059490 
End bp5060635 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content71% 
IMG OID637881567 
Producttransport system permease protein 
Protein accessionYP_483316 
Protein GI86742916 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.2131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGCCG CGGACGCGGT ACGGCTGCGG GCGGTGGCGG CGCTTCGACC CGCCCGCGGG 
ATGCCCGCGG TCACTGCCTG CGCCGTGCTG CCGCGCACGG CGCGCGGCGC GCGCGGCAGA
TTCTTGATCA CTCTGCTCGC CCTGGTGCTG GCGACACCGA TCGTTGTTGG GGCAGCGATC
GGCGTGGGTT CGGTATCGGT GCCTCCCGGT GAGGTGTGGT CCAGCGTCGT GGCTCATCTG
ACCGGCAACG GTGCTCAGTC CTCGATGATC AACGATCAGA TTATCTGGCA GGTGCGGACG
CCGCGGGTGT TGCTGGCGTT CGTGGTGGGT GCGGGCCTGG CCGTGGCCGG AGCCGTGCTG
CAGGCGGTGG TGCGTAACCC CCTCGCCGAT CCGTATGTGC TGGGCGTGTC CTCGGGTGCC
TCCGTCGCCG CGGTCGCTGT CCTCACCCTG GGAGGGGTCT CGTCGTCGGG GCTTGCCGCG
GCGGTGGGGG TGTCGGGGGC GGCGTTCATC GGTGCCGTTC TCACCCTGGC TCTCGTGATC
GCGTTAGGGC GTAGGCGCGG TTACCTGGAC CCGCAACGGC TGCTGCTCGC GGGGGTGGCG
CTGACCTATC TGTTCCAGGC TGGCACCAGC TACCTGCAGT TGCGGGTCGG CTCGAACCAA
CTCGCCGCGG TGCTGTTCTG GCTGCTGGGA ACGGTGTCGG GGGCCGAGTG GGACACACTG
GGGCTGCCCG CGTGCATCGT CGTGGCCGCG ACGCTGTGGC TGCTGGCGCA GGCCCGGTCG
TTGAATGCCT TGCTGCTCGG TGATGAGGCC GCCGCCTCGC TGGGGATCCC GGTCAGCCGG
CTGCGGACCC AGCTGCTGAT CGTCACCGCC GCTCTGACAG CGTCCGTCAT CTCCGTCGCC
GGCGGTGTCG CGTTCGTCGG CCTCATTGCG CCGCACTGCG TGCGGATGCT TATCGGGTCG
GACCACCGGC GGCTGCTCCC GGTAACGGCG CTGCTGGGCG GAACGTTCCT CGTGCTGGCC
GATCTCCTCG GCCGGGTCGT GGCCCGGCCG TTGGAGCTGC CGTTGAGCAT TATCACCGCG
GTCGCCGGGG TGCCCTTCTT CCTCGTGCTG CTGCGCCGGT CGGGACGGGC GAGTGGTGCC
TCGTGA
 
Protein sequence
MGAADAVRLR AVAALRPARG MPAVTACAVL PRTARGARGR FLITLLALVL ATPIVVGAAI 
GVGSVSVPPG EVWSSVVAHL TGNGAQSSMI NDQIIWQVRT PRVLLAFVVG AGLAVAGAVL
QAVVRNPLAD PYVLGVSSGA SVAAVAVLTL GGVSSSGLAA AVGVSGAAFI GAVLTLALVI
ALGRRRGYLD PQRLLLAGVA LTYLFQAGTS YLQLRVGSNQ LAAVLFWLLG TVSGAEWDTL
GLPACIVVAA TLWLLAQARS LNALLLGDEA AASLGIPVSR LRTQLLIVTA ALTASVISVA
GGVAFVGLIA PHCVRMLIGS DHRRLLPVTA LLGGTFLVLA DLLGRVVARP LELPLSIITA
VAGVPFFLVL LRRSGRASGA S