Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4241 |
Symbol | |
ID | 3907207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5059490 |
End bp | 5060635 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637881567 |
Product | transport system permease protein |
Protein accession | YP_483316 |
Protein GI | 86742916 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.2131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTGCCG CGGACGCGGT ACGGCTGCGG GCGGTGGCGG CGCTTCGACC CGCCCGCGGG ATGCCCGCGG TCACTGCCTG CGCCGTGCTG CCGCGCACGG CGCGCGGCGC GCGCGGCAGA TTCTTGATCA CTCTGCTCGC CCTGGTGCTG GCGACACCGA TCGTTGTTGG GGCAGCGATC GGCGTGGGTT CGGTATCGGT GCCTCCCGGT GAGGTGTGGT CCAGCGTCGT GGCTCATCTG ACCGGCAACG GTGCTCAGTC CTCGATGATC AACGATCAGA TTATCTGGCA GGTGCGGACG CCGCGGGTGT TGCTGGCGTT CGTGGTGGGT GCGGGCCTGG CCGTGGCCGG AGCCGTGCTG CAGGCGGTGG TGCGTAACCC CCTCGCCGAT CCGTATGTGC TGGGCGTGTC CTCGGGTGCC TCCGTCGCCG CGGTCGCTGT CCTCACCCTG GGAGGGGTCT CGTCGTCGGG GCTTGCCGCG GCGGTGGGGG TGTCGGGGGC GGCGTTCATC GGTGCCGTTC TCACCCTGGC TCTCGTGATC GCGTTAGGGC GTAGGCGCGG TTACCTGGAC CCGCAACGGC TGCTGCTCGC GGGGGTGGCG CTGACCTATC TGTTCCAGGC TGGCACCAGC TACCTGCAGT TGCGGGTCGG CTCGAACCAA CTCGCCGCGG TGCTGTTCTG GCTGCTGGGA ACGGTGTCGG GGGCCGAGTG GGACACACTG GGGCTGCCCG CGTGCATCGT CGTGGCCGCG ACGCTGTGGC TGCTGGCGCA GGCCCGGTCG TTGAATGCCT TGCTGCTCGG TGATGAGGCC GCCGCCTCGC TGGGGATCCC GGTCAGCCGG CTGCGGACCC AGCTGCTGAT CGTCACCGCC GCTCTGACAG CGTCCGTCAT CTCCGTCGCC GGCGGTGTCG CGTTCGTCGG CCTCATTGCG CCGCACTGCG TGCGGATGCT TATCGGGTCG GACCACCGGC GGCTGCTCCC GGTAACGGCG CTGCTGGGCG GAACGTTCCT CGTGCTGGCC GATCTCCTCG GCCGGGTCGT GGCCCGGCCG TTGGAGCTGC CGTTGAGCAT TATCACCGCG GTCGCCGGGG TGCCCTTCTT CCTCGTGCTG CTGCGCCGGT CGGGACGGGC GAGTGGTGCC TCGTGA
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Protein sequence | MGAADAVRLR AVAALRPARG MPAVTACAVL PRTARGARGR FLITLLALVL ATPIVVGAAI GVGSVSVPPG EVWSSVVAHL TGNGAQSSMI NDQIIWQVRT PRVLLAFVVG AGLAVAGAVL QAVVRNPLAD PYVLGVSSGA SVAAVAVLTL GGVSSSGLAA AVGVSGAAFI GAVLTLALVI ALGRRRGYLD PQRLLLAGVA LTYLFQAGTS YLQLRVGSNQ LAAVLFWLLG TVSGAEWDTL GLPACIVVAA TLWLLAQARS LNALLLGDEA AASLGIPVSR LRTQLLIVTA ALTASVISVA GGVAFVGLIA PHCVRMLIGS DHRRLLPVTA LLGGTFLVLA DLLGRVVARP LELPLSIITA VAGVPFFLVL LRRSGRASGA S
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