| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4231 |
|---|
| Symbol | |
|---|
| ID | 3907197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 5047526 |
|---|
| End bp | 5049781 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637881557 |
|---|
| Product | Terpene synthase, metal-binding |
|---|
| Protein accession | YP_483306 |
|---|
| Protein GI | 86742906 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCTT TCACGCTACC GGAGTTCTAC GTGCCCTATC CGGCACGGCT CAATCCGAAC
CTGGAACAGG CCCGCGTGCA CAGCAGGGCT TGGGCCGACG AGATGGAGAT GATCGACTCT
CCGCAGCACG GAACCGCGAT CTGGACCGAG GCCGACTTCG ACGCACACGA CTACGCCCTG
CTCTGTGCAT ACACCCATCC GGACTCCGTC AGCCGAAAAC TCGATCTGGT CACCGACTGG
TATGTCTGGG TTTTCTACTT CGACGACCAC TTCCTGGAGC TGTACAAGCG GTCCCACGAC
ATGGCCGGCG CCCGGGCCTA CCTCGACCGC CTGCCCGCCT TCATGCCCGT CGACGGTGAG
ATCACCGAGA CGCCGACCAA CCCGGTGGAA CGCGGACTCG CCGACCTGTG GACCCGGACC
GTCCCGGAGC GTTCCGCCGA CTGGCGGCGG CGGTTCGCGG TCAGCACCAA GAACCTGCTG
GACGAGTCCC TGTGGGAACT AGCCAACATC AACGCCGGCA GGCTCGCCAA CCCGATCGAA
TACGTCGAGA TGCGGCGCAA GGTCGGCGGC GCGCCCTGGT CGGCGAACCT CGTCGAGCAC
GCCGCCGACG CCGAGGTGCC GGCCCAGGTC GCGGCGACCC GGCCGCTGCA GGTACTGCGG
GACACCTTCG CCGACGCCGT GCATCTGCGC AACGACCTGT TCTCCTACCA GCGCGAGGTC
GAAGAGGAGG GCGAGCTCAG CAACGGCGTG CTCGTCATCG AACGTTTCCT CGGCTGTGGA
ACCCAGGAGG CCGCCGACAC GGTCAACGAC CTGCTCACCT CGCGGCTGCA CCAGTTCGAG
CACACCGCGG TCACCGAACT GCCGGCGGTC CTCGAGGAGC ACGGTGTCGA CCCGGGGAGC
CGGCTGGAGG TCCTGGCGTA CGTGAAGGGT CTGCAGGACT GGCAGTCAGG GGGCCACGAA
TGGCACCTGC GCTCGAGCCG GTACATGAAC CGGGCCGTGG CGCCTGAGAG CGGCGAGCTC
AGCGGACTCC TCGGACTCAC CGGTCTCGGT ACCTCGGCGG CCCGGATTGT GCCGTCCCTC
GTCACCACCA CACCGCGCCG GATCCGCTCC TTCACGCACA TCCCGCACCA GATCGTCGGG
CCGCTGCGCC ATCCCGACTT CTGCATGCCC TTCTCGACCG GGCAGAGCCC ACATCTGGAC
GCCTCCCGCC GGGAAAACAT CATCTGGGCC CGGGCGGTAG GGATGCTGGA CCCGATTCCG
GGCATCTGGG ACGAACACAA ACTGCGGGCG TTCGACTTCG CGCTGTGCTC GGCCGGAATC
CATCCGGACG CGACCCTGCC GGAACTGAAT CTGACGACGG ACTGGCTCAC CTGGGGGACC
TACGCCGACG ACTACTACCC GGTAATCTTC GGCCGCACCC GGGACATCCT CGGGGCCAAG
GTGTGCAACG CCCGGCTGTC GGAGTTCATG CCGCTGGACT CCCCCGTCAC CGCGGTGCCG
GCCAACGCGT TGGAACGCGG TCTGGCCGAC CTGTGGACGC GCACCACCGA GACCATGGCG
CCAGGCGCGC GCGAGACGTT CCGCGGCACC GTCGAGGTTA TGATCGACAG CTGGCTGTGG
GAGCTGGCAA ACCAGGCCCA GAATCGCATT CCCGACCCGA TCGACTACAT TGAGATGCGC
CGGGCGACCT TCGGTTCGGA TCTGACGATG AGCCTGGCCC GGCTGGCCCG GCTGGCCCAG
GAACAGACCG TGCCACCCGA GATCTACCGC ACCCGGCCGA TCCAGGCCTT GGAGAACGCG
GCCGCGGACT ACGCCTGTCT CCTCAACGAC GTCTTCTCCT ATCAGAAGGA GATCCAGTTC
GAGGGTGAGA TCCACAACTG TGTCCTCGTC GTCGAGAACT TCCTCGACTG CGACCGGGAG
CGTGCCCTCG CGGTGGTCAA CGATCTGATG ACCTCCCGGA TACGCCAGTT CGAGCACATC
GTGGCGCACG AGCTTCCGGC GCTGTTCGAC AGCTTCGCCC TGGACGCGTC GGCGCGGCAG
GCGCTGCTGG GCTACGCGCG GGAACTCCAG AACTGGCTGG CCGGGATCCT CCGCTGGCAT
GAGGGCACGC ATCGGTACGA GGAGTCCGAA CTGCGGTACC ACCCAGCGGC GGGAGTACGG
CCCTTCGGCG GCCCCACGGG CCTGGGCACC TCGTCCGCCC ACGTCCGCCC ACGTCCGGCC
GCGGCGGCCG GCGCGGCCGG CGATAGTGAA ATGTAG
|
|---|
| Protein sequence | MQPFTLPEFY VPYPARLNPN LEQARVHSRA WADEMEMIDS PQHGTAIWTE ADFDAHDYAL
LCAYTHPDSV SRKLDLVTDW YVWVFYFDDH FLELYKRSHD MAGARAYLDR LPAFMPVDGE
ITETPTNPVE RGLADLWTRT VPERSADWRR RFAVSTKNLL DESLWELANI NAGRLANPIE
YVEMRRKVGG APWSANLVEH AADAEVPAQV AATRPLQVLR DTFADAVHLR NDLFSYQREV
EEEGELSNGV LVIERFLGCG TQEAADTVND LLTSRLHQFE HTAVTELPAV LEEHGVDPGS
RLEVLAYVKG LQDWQSGGHE WHLRSSRYMN RAVAPESGEL SGLLGLTGLG TSAARIVPSL
VTTTPRRIRS FTHIPHQIVG PLRHPDFCMP FSTGQSPHLD ASRRENIIWA RAVGMLDPIP
GIWDEHKLRA FDFALCSAGI HPDATLPELN LTTDWLTWGT YADDYYPVIF GRTRDILGAK
VCNARLSEFM PLDSPVTAVP ANALERGLAD LWTRTTETMA PGARETFRGT VEVMIDSWLW
ELANQAQNRI PDPIDYIEMR RATFGSDLTM SLARLARLAQ EQTVPPEIYR TRPIQALENA
AADYACLLND VFSYQKEIQF EGEIHNCVLV VENFLDCDRE RALAVVNDLM TSRIRQFEHI
VAHELPALFD SFALDASARQ ALLGYARELQ NWLAGILRWH EGTHRYEESE LRYHPAAGVR
PFGGPTGLGT SSAHVRPRPA AAAGAAGDSE M
|
|---|
| |