| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4152 |
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| Symbol | |
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| ID | 3907117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4951639 |
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| End bp | 4952730 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637881480 |
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| Product | hypothetical protein |
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| Protein accession | YP_483229 |
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| Protein GI | 86742829 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5563] Predicted integral membrane proteins containing uncharacterized repeats |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies)
[TIGR02913] probable extracellular repeat, HAF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGAA CAAGCACGTC ACCCCGAGTT GCCGGGACGA CGCGGCGACG GCGAACCCGC
CGCGTCCGCG GTTTTCGCGC GATCGGTGCT GCGGTGGTGG CGCTGGCCCT CCCGCTGGTC
AGCGCCGGAC CCTCGTCGGC CGGCACCGGC GGGTCGGTGA TCGACCTCGG TACCCTGCCC
GGCGGCAGCA GCAGCGGCGC CTACGACGTG AACAACAGCG CGGTCGTCGT CGGCTACTCG
GCGAGTGCCA GCGGCCGCAA CCACGCCGTC CGGTGGAACA GCCTGGGTGT ACCGACCGAC
CTCGGCACCC TGCCCGGGGA CGAGGCGAGC GTCGCCTTCA CCATCAACGA CGCTGGCACC
GTGACGGTTG GCGCCTCCCT GATTCCCGGT GGCCCCACCC ATCCGGTGGA ATGGGACGCG
GCTGGCCAGA TCACCGCGCT GACGACGCCT GCCGGGAGCA TTCTGAGCCG GGCCTATGCG
GTCAACAACC AGGGCACGGT CATCGGCTTC TGGAGTGGGC CGGACCGGTT GTACCACGCG
CTGCGGTGGA CCTCGGCCAG CACGCCCGTG GCCCTGCCCC AGCTACCGGG GGATACCGCC
AGCTCCGCGG GATGGATCAA CAACAGGGGT GTGATCGTCG GCTATTCGAA GACTGCAGCC
GGCGTTGCGC GGGCCGTCCG GTGGAACCCT GACGGAACCG TCTCCAGACT CGCCGACCTG
CCGGGCAGCG ACTCCAGTGA GGCGAGCGCC GTCAGCGACA CCGGCATCAT CGTCGGTCTC
GCCACCACGG GTGCGAGGTC GCACGCGGTC CGCTGGGACC ACGCCGGTGG GATCACCGAG
CTGCCGCCGC TGCCCGGCGA CACCGGTGCC GGTGCCTATG GCGTCAACGA GCGGGGGATC
GTCATCGGCT TCTTAAGCGC GAGCGACGGC ACCCGCAGCG CGGTGGCGTG GAGTCCGAGC
GGCCAGGTCA CCCGGCTGCC GACCGCCACC GCCGGGCCGG CGGAGGCGTA CGGCGTGAAC
GACCGAGGCG CGGTCGCGGG GTCCTCCACC GCGGCCGACG GATCGGCTCA CGCAACACTC
TGGCTGGCCT GA
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| Protein sequence | MTGTSTSPRV AGTTRRRRTR RVRGFRAIGA AVVALALPLV SAGPSSAGTG GSVIDLGTLP
GGSSSGAYDV NNSAVVVGYS ASASGRNHAV RWNSLGVPTD LGTLPGDEAS VAFTINDAGT
VTVGASLIPG GPTHPVEWDA AGQITALTTP AGSILSRAYA VNNQGTVIGF WSGPDRLYHA
LRWTSASTPV ALPQLPGDTA SSAGWINNRG VIVGYSKTAA GVARAVRWNP DGTVSRLADL
PGSDSSEASA VSDTGIIVGL ATTGARSHAV RWDHAGGITE LPPLPGDTGA GAYGVNERGI
VIGFLSASDG TRSAVAWSPS GQVTRLPTAT AGPAEAYGVN DRGAVAGSST AADGSAHATL
WLA
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