Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4137 |
Symbol | |
ID | 3907102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4938512 |
End bp | 4939219 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637881465 |
Product | TetR family transcriptional regulator |
Protein accession | YP_483214 |
Protein GI | 86742814 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.857074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGC GCCCGACGCG TGCCCCGCGG CATGCGGAGG CGGAGCGCAA CGACAGGGCG CTGCTCGATG CGGCTCGCCA GGTTCTGGCG GCTGACGGAG CCCATGCGTC GGTCGCCGCG ATCGCTGCCC GCGCCGGCGT CGGGATCGGC AGTCTCTACC GGCGTTACCG CACCAAGGAA GAGCTGTTCC AACGGCTGTC GATGCTGTCG CTCGAAAGCT GGAACGCGGC CGCCGAGAGC GCCCTCGCCA TCGACGACCC CTGGACGGGG CTGGCGGAGT TCGTCCGTGG CCGTATCGAG TTCGGCCAGG GCTCGCTCGC GCCGATCGCC GGCACCATCG AGGTGACCGA GCAGATGCAG GCCGCGGCGG ACCTCGGCGA CGAGCTGCTC GGTGCGCTGG TGGAGCGTGC CCGTCAGGCC GGGGTCCTAC GGGGCGACGT ATCCCATTTC GACGTCTCGC TGCTGATCGA GCAGCTCGGC CGGTCGCACC TGCTGGAGCA GGTCCGCGGG CTCGCCCGTG ACGATCTGTT CGCGGCGGCG GCCCAGGCCC GGGCCCGCAT CATCGCGATC GCGCTGGACG GGCTGCGTGC CGAGAACGGT CCGGCCCGAG CATCGCTGCC CGGTAGCCCG CCGACCAGCC TGCTCTTCGA CGAGCGCTGG GTACGCCGGC CGGCGTCCGG CGATGACGGT GACGATGCTC TCGACTGA
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Protein sequence | MAGRPTRAPR HAEAERNDRA LLDAARQVLA ADGAHASVAA IAARAGVGIG SLYRRYRTKE ELFQRLSMLS LESWNAAAES ALAIDDPWTG LAEFVRGRIE FGQGSLAPIA GTIEVTEQMQ AAADLGDELL GALVERARQA GVLRGDVSHF DVSLLIEQLG RSHLLEQVRG LARDDLFAAA AQARARIIAI ALDGLRAENG PARASLPGSP PTSLLFDERW VRRPASGDDG DDALD
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