Gene Francci3_4135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4135 
Symbol 
ID3907100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4937086 
End bp4937817 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID637881463 
Productmethyltransferase type 11 
Protein accessionYP_483212 
Protein GI86742812 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.399461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCAG CGGATGGGGT CGCCGTGTAC GAGGACAACC GAGCTGTCGA GATGTATGAC 
GTCCTTTACC GCAGCCGGAA GGACTACGCG GCGGAGGCCC GGCGGGTCGC CGAGCTGGTC
CGGACCCGCA CGCCCGACGC ACGCAGCCTG CTCGATGTGG CCTGCGGCAC CGGAAACCAC
CTGGAGCACT TCGCGACGCT CTTCGCCGAC GTAGCGGGGA CCGACCTGTC GAAGCCGATG
CTCTCGGTCG CCGGCCGGCG GCTCCCCGGC CGGCCGCTGC TGCAGGCCGA CATGCGTAGC
CTGTGGGTTG GCCGGACCTT CGACGCGGTC GTCTGCATGT TCAGCTCCAT CGGCTATCTG
CGCACTTTCG AGGACCTGGC GGCCGCGCTG CGCTGCATGG CCTCGCACCT GTCGCCGGAC
GGCACCGTCG TCATCGAGCC GTGGTATTTT CCGGACACGT TTCTGGATGG TTATGTCGCG
GCGCACGCGG TGTCCGAGGG AAACCGGGCG ATAACCCGTG TCTCCCACTC GACCCGCGTG
GGTGACCAGA CCCGCATGGA ACTGCACTAC CTGCTGGCCG GCGCCGACGG TGTCAGCCAT
ATCAAGGAGA TCGACCTGCT GACCCTGTTC ACCCGGGGCC AGTACGAGGA GGCGTTCGCC
CAGGCGGACC TCAAGGCGGA GCTCATCGCC GTCGACGGTG GACCCGGGCT GTTCGTCGGC
ATTAGGGTCT GA
 
Protein sequence
MNPADGVAVY EDNRAVEMYD VLYRSRKDYA AEARRVAELV RTRTPDARSL LDVACGTGNH 
LEHFATLFAD VAGTDLSKPM LSVAGRRLPG RPLLQADMRS LWVGRTFDAV VCMFSSIGYL
RTFEDLAAAL RCMASHLSPD GTVVIEPWYF PDTFLDGYVA AHAVSEGNRA ITRVSHSTRV
GDQTRMELHY LLAGADGVSH IKEIDLLTLF TRGQYEEAFA QADLKAELIA VDGGPGLFVG
IRV