| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4103 |
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| Symbol | |
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| ID | 3907067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4910923 |
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| End bp | 4911750 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637881431 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_483180 |
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| Protein GI | 86742780 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGGT CGGCCGACCA TGGCGGAGTC ATCGGAGGAA ACATGAGCCA GCAGAGCCAG
CCGGTGGCAT TGGTCACCGG TGCCACCAGC GGTATCGGAC TGGAGATTGC CACCCGGCTC
GCGCGTCGCG GCGCCCGGGT GTACCTCTGC GCGCGATCGG CTGACAATGT GGCCGCGACG
GTGAAGTCAC TACAGGAACA GAACCTCGCC GTGGACGGCC GGGCCTGCGA CGTCACGGAC
GGGACGCAGG TCACCGATCT GATCTGCGCG GTCGTCGACC GGTTCGGGCC GCTGGACATT
CTGGTCAACA ATGCCGGACG CAGCGGCGGC GGCGTCACCG CGGAGATCGC CGACGAGCTG
TGGCTTGACG TCATCAACAC CAACCTCAAC AGCGTCTTCA TCGTCACCCG GGAAGCGCTG
CGCGCCGGTG GCCTGGCCGG CCGGGCGGGC GGGCGAATCA TCAACATCGC CTCCACAGGG
GGCAAGCAGG GAGTGCAGAA CGGCGCACCA TATTCGGCCG CGAAGCACGG TGTGGTGGGC
CTGACCAAGG CATGGGGCCT GGAACTGGCC AAGACCGGCG TCACCATGAA CGCGGTCTGC
CCCGGCTTCG TCGAGACGCC CATGGCACAG ACCGTCCGTG GGACCTACGC CAAGCTCTGG
GGCGTCACCG AGGCCGAGGC GCACGACCGG GTGACCGCGC GTGTCCCGAT CGGCCGCTAT
GTCCGGCCGG ACGAGGTCGC CGCGATGGTC GAGTACCTCG TCAGTGACGA GGCTGCCGCC
GTGACCGCCC AGGCAATCAA CGTCTGCGGC GGTCTCGGCA ACTACTGA
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| Protein sequence | MSGSADHGGV IGGNMSQQSQ PVALVTGATS GIGLEIATRL ARRGARVYLC ARSADNVAAT
VKSLQEQNLA VDGRACDVTD GTQVTDLICA VVDRFGPLDI LVNNAGRSGG GVTAEIADEL
WLDVINTNLN SVFIVTREAL RAGGLAGRAG GRIINIASTG GKQGVQNGAP YSAAKHGVVG
LTKAWGLELA KTGVTMNAVC PGFVETPMAQ TVRGTYAKLW GVTEAEAHDR VTARVPIGRY
VRPDEVAAMV EYLVSDEAAA VTAQAINVCG GLGNY
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