Gene Francci3_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4008 
Symbol 
ID3906969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4791380 
End bp4791796 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content65% 
IMG OID637881337 
Productputative IS1648 transposase 
Protein accessionYP_483087 
Protein GI86742687 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTG GTGATCTGAC CGATGGTGAA TGGGAGTTGA TCGAGCCGCA CCTCCCGCTG 
GGGGCGTCCG GACCGATCCC TGACCTGCGC AGCTATTTCA ACGCGGTGAT GTGGAGGTTC
CGTACCGGCA GCCCCTGGCG GGACGTGCCG AACAGCTACG GCTCCTGGTC GACGATCTAC
GACCGGTTCC GCATGTGGGC GCGGGACGGG GTCTTCCAGA CCCTCATGGA CGCAATGATC
ACCGAGGCGG CGGCGCGCGA CGATGTCGAT CTCAGCCTGG TCAGCGTGGA CTCCACCATC
GCCCGCGCGC ATCACCACGC GGCGGGCATG GCGGTCGACC CGGACCTCCT GGAGGACATA
GAGAAGGCCC TGACGGAGGA AAAGGGGCTT CAGAAACCGG GCAAAACGAC TCCGTAA
 
Protein sequence
MTRGDLTDGE WELIEPHLPL GASGPIPDLR SYFNAVMWRF RTGSPWRDVP NSYGSWSTIY 
DRFRMWARDG VFQTLMDAMI TEAAARDDVD LSLVSVDSTI ARAHHHAAGM AVDPDLLEDI
EKALTEEKGL QKPGKTTP